Nicotiana sylvestris (wood tobacco): 104228995
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Entry
104228995 CDS
T05026
Name
(RefSeq) uncharacterized protein
KO
K24755
WD repeat-containing protein 76
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104228995
03036 Chromosome and associated proteins [BR:
nsy03036
]
104228995
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104228995
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104228995
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104228995
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
104228995
DSBR (double strand breaks repair)
Other DSBR factors
Others
104228995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
WD40
EIF3I
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR11_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
104228995
NCBI-ProteinID:
XP_009779861
UniProt:
A0A1U7WRC8
LinkDB
All DBs
Position
1:complement(51107519..51111770)
Genome browser
AA seq
496 aa
AA seq
DB search
MAPEKMTEYERRRLENIKRNEEMLASLKIQSRLFQLSAVTKRPKAQSKSYQASPQKKQRS
KSPVVLRRSLRTQGMAPDSSTAGGLKDDFDDLPSRISPNKSSQPTTKKSPREPTSISMRD
AYSGDFDVSNQKLIETIKVFSRTIDDANEGMDQDSVLGDWTEKRKASGTVRLESLRLEPD
NIARVVPGRILNVRFFPTNNVRMVAVGNKFGNIGFWNVDAPREDGDGIYLYHPHSGPVSG
IIMDPFSVSKIFTSCYDGFIRMMDIEKEMFDLVYLSEHSIFSISQRAHDMKSIYYGEGSG
ELGIWDLRAGKSSASWNLHDERINTIDFTSGNCNIMATSSTDGSACIWDLRKVSAHKPKS
LHTVFHKRAVHSAYFSPSGRFLATTSIDDKVGLLSGANYEDTSMISHYNHTNRWISSFRG
IWGWDDSYIFIGNMQRGVDVISVADKKLEFTLRSEHMTAIPCRFDAHQEKVGMLAGATSG
GQIYIWTASSVGIYGS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggagaaaatgacggagtacgagcggcggaggcttgagaatataaagcgcaat
gaagaaatgcttgcctcccttaagattcagtcccgactttttcaactttccgctgtcacc
aagcgtccaaaagctcaaagtaaatcatatcaagcgagtccacagaagaaacagaggtct
aaatcaccagttgtgctgcggcggtctctcaggactcaaggtatggcaccggattcttct
acagctggtgggctaaaggatgattttgatgatctcccaagtaggatatcacctaacaag
agctctcaacccacaaccaaaaagtcgcctcgagaacctacatctataagtatgagggat
gcatatagtggcgactttgatgtctcaaatcaaaagttgattgaaacaattaaggttttc
tctcgtacaattgacgatgcaaatgagggcatggatcaagattctgttttaggtgactgg
acagagaaaagaaaggcctctggtacagttcgtttggaatcactgagattggaaccagac
aacatagcacgggttgtgccagggagaatattaaatgtgcggtttttccccaccaacaat
gttcgaatggttgctgtagggaacaaatttggcaatataggtttttggaatgttgatgct
ccacgagaggatggagatgggatttatttgtatcatcctcattcagggccagtttcagga
ataattatggaccctttttctgtgtcaaagatattcacttcttgctacgatggatttatc
aggatgatggatattgaaaaggaaatgtttgatttagtttatttgagcgagcattccata
ttttccatatcacagcgggcacatgatatgaaatctatatattatggcgaaggcagtggg
gaacttggtatttgggatctcagggcaggaaaatcttcagcgtcgtggaatctgcatgac
gaaaggattaacacaattgattttacctcaggaaactgtaatattatggcgacaagttct
acagatggtagtgcatgcatttgggatttgagaaaagttagtgcacataaaccaaaatct
ttgcacactgtcttccacaaaagagctgtgcactcggcttacttctcaccttctggaagg
tttcttgcgacaacaagtattgatgataaagttggtttgttgagtggcgctaattatgaa
gatacatctatgatctctcattataaccacacaaacagatggatttcctcattcagagga
atatggggttgggatgattcctacatcttcatcggcaatatgcaaagaggagttgatgtc
atctcagtagctgacaagaaacttgagtttaccttacgaagcgaacacatgactgctatt
ccatgccggtttgatgcacaccaggagaaagttggaatgctcgcaggggctacaagcggt
gggcagatctatatctggacagcatcttcagttggtatctatggatcctag
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