Nicotiana sylvestris (wood tobacco): 104229120
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Entry
104229120 CDS
T05026
Name
(RefSeq) uncharacterized protein
KO
K12586
exosome complex component RRP43
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104229120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104229120
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104229120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104229120
NCBI-ProteinID:
XP_009780009
UniProt:
A0A1U7WZF9
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Position
12:98217452..98223996
Genome browser
AA seq
303 aa
AA seq
DB search
MAAVNGSSDLSSEMEVDAFRRLFPLRYHEYHLLKSVRPDARKLGSARDTTLALGAVASAD
GSALAKIGSTTMLAAIKMEVMTPTVECPDEGSIAIEFHMPPICSPLVRPGRPAEAAEVIS
KQLSDTIFSSGMIDLKELCLVGGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLNIP
VVSLNDDGRIVLVSEDNVRGKLEKEPVNKEKRKLKLNSPPFSLTCILHKNYILADPTAEE
ESIMETVVTVVLDSYYQLVSLYKPGGPVLAHTSVIQDCVALARRRVKELQNVLNEAISDM
EVD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtcaatggctcaagtgacttgtcttcagagatggaggtggatgcatttaga
cgcctcttccctttgcgctatcatgagtatcatcttcttaaatctgtccgacctgatgcc
cgaaagcttggaagtgctagagatacaacacttgcacttggtgccgttgcctctgctgat
ggatcagcactagcaaagattggatccactacaatgctggctgccatcaaaatggaagtc
atgacaccgacagtggaatgtccagatgagggatccatagctatcgaatttcacatgcct
cccatttgttctcccctggttcggcctggtaggcctgcagaggcagcagaagtaatttcg
aagcagctgtcagacactatcttcagttctggcatgattgacttaaaagagttgtgcttg
gttggaggaaaagctgcatggatggcttacctggacatatactgtttggatgctgatggt
gccctgtttgatgctgcattactatctgcagttgctgccttttcgcatttgaacattcca
gttgtgtctttgaatgatgatgggcgaatagttcttgtgtctgaggacaatgtcagaggg
aaattggagaaggagcctgtcaataaagagaaaagaaaactgaaattgaactctccacca
ttctccttaacatgcatacttcacaagaactacatcttagcagatcctacagcagaggaa
gaatctataatggaaacagttgtaactgtggtattggattcatattaccagcttgtttca
ctttataagccaggtggaccagttcttgcccatacatcagttatccaggattgtgttgcg
ctggcaagacgtagagtgaaagagcttcagaatgtattgaatgaagctatttcggatatg
gaggtagactga
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