KEGG   Nicotiana sylvestris (wood tobacco): 104229204
Entry
104229204         CDS       T05026                                 
Name
(RefSeq) uncharacterized protein
  KO
K10756  replication factor C subunit 3/5
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03030  DNA replication
nsy03410  Base excision repair
nsy03420  Nucleotide excision repair
nsy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104229204
   03410 Base excision repair
    104229204
   03420 Nucleotide excision repair
    104229204
   03430 Mismatch repair
    104229204
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nsy03032]
    104229204
   03036 Chromosome and associated proteins [BR:nsy03036]
    104229204
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104229204
DNA replication proteins [BR:nsy03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104229204
  DNA Replication Termination Factors
   ELG1-RFC complex
    104229204
Chromosome and associated proteins [BR:nsy03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104229204
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104229204
  Check point factors
   HRAD17(Rad24)-RFC complex
    104229204
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 RuvB_N AAA_16
Other DBs
NCBI-GeneID: 104229204
NCBI-ProteinID: XP_009780088
UniProt: A0A1U7WND1
LinkDB
Position
9:complement(168507808..168517078)
AA seq 734 aa
MESYSASNRALQVKNSSFVKQRRSGYEPSDTETDWQESPRLNAKNVDINVLAFDQANKFW
SINRRRPSKSPYKSRRDEGDVHFPGLTLHVISPFSHSNARRNVSPFSKSEHRGRHNSKEE
HHLDKQSFSSSTRKQNNIVLNNSTNNDVAVRGKANYIYSRRALSAPRPALYDMSKERRRA
EITRSPTRTLSRREREREIQRKHEPSVGEMNVMLANAKISRGPNIPVGVNNMFQSTESIS
PSDIFLSKGYSAFTQSSKFNSVPRISTDKNVSSVNKMRANFKQNSRGTISSSTIVTRTAT
TNPSSAISRQSSNLSDATRRTNRSAKKFITNRKKSTTQTEAWFSCIKNGSCRNSRKDGSP
ERARPINEALLIEKAFVVESLRQFWADKHQPDSLEGFICNKQQALLLSHLVSSNEPLPHM
LFKGPPGYGKRALSMALLREIYGDAICNISHDLKYFYIQETKPVQVIVPVSSSPHHIELN
VHLEPNARFALMALVKQISCEYTLTPEVSRINMKADSKVIVLHDADRAEENMQHLIKWIM
DCYSDACKLILFCETDASILELVKSRCTVIEVEAPATNEIMEVLIEVARKEDLELSRGFA
AKIATKSKQNLRRAIMALEACKAHNYPFAEDQPISVGWEESVVELAAEILADPTPTRLFS
IRGKFQKLLVEFVHPKLILLKLVEQFLKRVDGGLKREIYYWHAYYEKRLPVGTNALLKLE
EFVAKFMSIYRKQL
NT seq 2205 nt   +upstreamnt  +downstreamnt
atggagagttattctgcttctaacagagcgttacaagttaaaaattcgtcatttgtgaag
caaaggcgaagtggatatgagccatctgatacagagaccgattggcaggaaagtccaaga
ctaaatgcaaagaatgttgatataaatgtattagcctttgatcaagcgaacaaattttgg
agtataaaccggagaaggcctagcaaatccccgtataaatcgcgcagagatgaaggtgat
gttcattttcctggacttactctacatgttattagtccattttcacattcaaatgcacgt
agaaatgtcagccccttttcaaaatccgaacatcgaggtagacataattcgaaagaggaa
catcaccttgacaagcaaagcttttcgagttcaactagaaagcaaaataacatagtacta
aataatagtactaacaatgatgttgcagttcgtggcaaagcaaactatatatatagtcgc
agggctctatccgctcctagacctgctctttacgacatgtccaaggagcggagaagagca
gaaataacacgatccccaacgaggactttgtccaggagagaacgagaaagagaaatacag
cgcaaacatgaaccttcagtaggtgaaatgaatgtaatgttagccaatgcaaagatctca
agaggccccaatattccagttggtgtgaataatatgtttcaaagtactgaatctatttca
ccaagtgatattttcttgtctaagggatattcagcttttactcaatcaagcaaattcaat
tcagtgccccggatatcgactgataaaaatgttagttctgtgaataaaatgcgcgcgaat
ttcaagcagaatagcaggggaactatttcatctagtactattgtgacacgaacagcaaca
acgaatccgagttctgctataagtaggcagagcagtaatctaagtgatgctactagaagg
acgaatagaagtgcgaaaaaattcataacaaataggaaaaagagtactactcaaacagaa
gcatggttttcttgtataaagaatggatcttgtagaaactcaagaaaagatggatctcca
gaaagagcgaggccgattaatgaagctttattaattgagaaggcatttgttgttgaaagt
ttgagacaattttgggctgataaacatcaacctgattcattggagggattcatttgcaac
aagcaacaagctttactacttagtcatcttgtttcttcaaatgaaccactcccacacatg
ttgttcaagggtcctccgggatatggaaaaagagcattatcgatggctcttttgcgtgaa
atctatggcgatgcaatttgcaatatatcccatgatctgaaatacttctacatccaggaa
acgaagccggttcaagtcattgtaccagtaagctcaagtcctcaccatattgagctcaat
gttcatttagagcctaatgctagatttgcattaatggctttggttaagcaaataagctgt
gaatacacactaactccagaagtaagcaggattaatatgaaggcagattccaaagttata
gttctgcacgatgcggatagagctgaggagaacatgcaacacttaataaaatggataatg
gactgttattcagatgcttgtaagctcattctcttctgtgaaaccgatgcatctatactc
gagttagtgaaaagtcgctgcacagtgattgaagttgaagctcccgcgactaatgaaatt
atggaagttctcattgaggtagcaagaaaggaagaccttgaactttctaggggctttgct
gctaaaatagctacaaaatcaaagcaaaacctgagaagagcaattatggctcttgaagct
tgcaaagcacacaactatccttttgctgaggatcaaccaatttcagtaggatgggaagaa
tctgtagtagaacttgcagctgaaattctagctgatccaactccaacaaggttattttct
attcggggcaagttccaaaaactcctagtcgagtttgtgcacccaaaacttatactcctg
aaacttgttgaacaattccttaagagggttgatggaggtttaaaaagggaaatatattat
tggcatgcttattatgaaaaaaggctcccagttggaacaaatgctctcttaaaattagaa
gaatttgtagccaaatttatgagcatatacaggaaacaattatga

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