Nicotiana sylvestris (wood tobacco): 104229204
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Entry
104229204 CDS
T05026
Name
(RefSeq) uncharacterized protein
KO
K10756
replication factor C subunit 3/5
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03030
DNA replication
nsy03410
Base excision repair
nsy03420
Nucleotide excision repair
nsy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104229204
03410 Base excision repair
104229204
03420 Nucleotide excision repair
104229204
03430 Mismatch repair
104229204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsy03032
]
104229204
03036 Chromosome and associated proteins [BR:
nsy03036
]
104229204
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104229204
DNA replication proteins [BR:
nsy03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104229204
DNA Replication Termination Factors
ELG1-RFC complex
104229204
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104229204
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104229204
Check point factors
HRAD17(Rad24)-RFC complex
104229204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
RuvB_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
104229204
NCBI-ProteinID:
XP_009780088
UniProt:
A0A1U7WND1
LinkDB
All DBs
Position
9:complement(168507808..168517078)
Genome browser
AA seq
734 aa
AA seq
DB search
MESYSASNRALQVKNSSFVKQRRSGYEPSDTETDWQESPRLNAKNVDINVLAFDQANKFW
SINRRRPSKSPYKSRRDEGDVHFPGLTLHVISPFSHSNARRNVSPFSKSEHRGRHNSKEE
HHLDKQSFSSSTRKQNNIVLNNSTNNDVAVRGKANYIYSRRALSAPRPALYDMSKERRRA
EITRSPTRTLSRREREREIQRKHEPSVGEMNVMLANAKISRGPNIPVGVNNMFQSTESIS
PSDIFLSKGYSAFTQSSKFNSVPRISTDKNVSSVNKMRANFKQNSRGTISSSTIVTRTAT
TNPSSAISRQSSNLSDATRRTNRSAKKFITNRKKSTTQTEAWFSCIKNGSCRNSRKDGSP
ERARPINEALLIEKAFVVESLRQFWADKHQPDSLEGFICNKQQALLLSHLVSSNEPLPHM
LFKGPPGYGKRALSMALLREIYGDAICNISHDLKYFYIQETKPVQVIVPVSSSPHHIELN
VHLEPNARFALMALVKQISCEYTLTPEVSRINMKADSKVIVLHDADRAEENMQHLIKWIM
DCYSDACKLILFCETDASILELVKSRCTVIEVEAPATNEIMEVLIEVARKEDLELSRGFA
AKIATKSKQNLRRAIMALEACKAHNYPFAEDQPISVGWEESVVELAAEILADPTPTRLFS
IRGKFQKLLVEFVHPKLILLKLVEQFLKRVDGGLKREIYYWHAYYEKRLPVGTNALLKLE
EFVAKFMSIYRKQL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggagagttattctgcttctaacagagcgttacaagttaaaaattcgtcatttgtgaag
caaaggcgaagtggatatgagccatctgatacagagaccgattggcaggaaagtccaaga
ctaaatgcaaagaatgttgatataaatgtattagcctttgatcaagcgaacaaattttgg
agtataaaccggagaaggcctagcaaatccccgtataaatcgcgcagagatgaaggtgat
gttcattttcctggacttactctacatgttattagtccattttcacattcaaatgcacgt
agaaatgtcagccccttttcaaaatccgaacatcgaggtagacataattcgaaagaggaa
catcaccttgacaagcaaagcttttcgagttcaactagaaagcaaaataacatagtacta
aataatagtactaacaatgatgttgcagttcgtggcaaagcaaactatatatatagtcgc
agggctctatccgctcctagacctgctctttacgacatgtccaaggagcggagaagagca
gaaataacacgatccccaacgaggactttgtccaggagagaacgagaaagagaaatacag
cgcaaacatgaaccttcagtaggtgaaatgaatgtaatgttagccaatgcaaagatctca
agaggccccaatattccagttggtgtgaataatatgtttcaaagtactgaatctatttca
ccaagtgatattttcttgtctaagggatattcagcttttactcaatcaagcaaattcaat
tcagtgccccggatatcgactgataaaaatgttagttctgtgaataaaatgcgcgcgaat
ttcaagcagaatagcaggggaactatttcatctagtactattgtgacacgaacagcaaca
acgaatccgagttctgctataagtaggcagagcagtaatctaagtgatgctactagaagg
acgaatagaagtgcgaaaaaattcataacaaataggaaaaagagtactactcaaacagaa
gcatggttttcttgtataaagaatggatcttgtagaaactcaagaaaagatggatctcca
gaaagagcgaggccgattaatgaagctttattaattgagaaggcatttgttgttgaaagt
ttgagacaattttgggctgataaacatcaacctgattcattggagggattcatttgcaac
aagcaacaagctttactacttagtcatcttgtttcttcaaatgaaccactcccacacatg
ttgttcaagggtcctccgggatatggaaaaagagcattatcgatggctcttttgcgtgaa
atctatggcgatgcaatttgcaatatatcccatgatctgaaatacttctacatccaggaa
acgaagccggttcaagtcattgtaccagtaagctcaagtcctcaccatattgagctcaat
gttcatttagagcctaatgctagatttgcattaatggctttggttaagcaaataagctgt
gaatacacactaactccagaagtaagcaggattaatatgaaggcagattccaaagttata
gttctgcacgatgcggatagagctgaggagaacatgcaacacttaataaaatggataatg
gactgttattcagatgcttgtaagctcattctcttctgtgaaaccgatgcatctatactc
gagttagtgaaaagtcgctgcacagtgattgaagttgaagctcccgcgactaatgaaatt
atggaagttctcattgaggtagcaagaaaggaagaccttgaactttctaggggctttgct
gctaaaatagctacaaaatcaaagcaaaacctgagaagagcaattatggctcttgaagct
tgcaaagcacacaactatccttttgctgaggatcaaccaatttcagtaggatgggaagaa
tctgtagtagaacttgcagctgaaattctagctgatccaactccaacaaggttattttct
attcggggcaagttccaaaaactcctagtcgagtttgtgcacccaaaacttatactcctg
aaacttgttgaacaattccttaagagggttgatggaggtttaaaaagggaaatatattat
tggcatgcttattatgaaaaaaggctcccagttggaacaaatgctctcttaaaattagaa
gaatttgtagccaaatttatgagcatatacaggaaacaattatga
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