Nicotiana sylvestris (wood tobacco): 104229765
Help
Entry
104229765 CDS
T05026
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104229765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sel1
bHLH-MYC_N
TPR_7
Motif
Other DBs
NCBI-GeneID:
104229765
NCBI-ProteinID:
XP_009780768
UniProt:
A0A1U7WQB0
LinkDB
All DBs
Position
3:complement(207946512..207952677)
Genome browser
AA seq
676 aa
AA seq
DB search
MRNRRIRRLSFALLLLALLPISTLGRQLVLVLSQDDLAEAAGDSTNLGDDTSDTGFDDFI
DSEAKPDYVLDPGSWSPIFEPAVAPHDNLGDEGSYYKTVSKIVKASSRGDERAMEEAASE
IEAAASAGHPHAQSILGFLYGMGIGRERNKAKSFLYHHFAAEGGNMQSKMALAYTYSRQE
MHDKAVKLYAELAEVAINSFLISKDSPVIEPVRIHSGAEENKEALRKSRGEEDEDFQILE
YQAQKGNAGAMYKIGIFYYFGLRGVRRDHTKALSWFLKAVEKGEARSMELLGEIYARGAG
IQRNFTKALEWLTLASKQQLFSAYNGLGYLHVKGYGVEKNNTKAKEYFEKAAENGEAGGF
YNLGVMFLKGIGVKRDVKLAFKYLSAAFDAGQPKAFYQLAKMFQTGVGYKKNVPLATALY
KLVAERGPWSSLSRWALESYLRGDVGKAFLLYSRMAELGYEIAQSNAAWILDKYGERSMC
LGESGVCSDEERHQRAHALWWQASEQGNEHAALLIGDAYYYGRGTERDYERAAEAYMHAK
SQSNAQAMFNLGYMHEHGQGLPFDLHLAKRYYDQALEIDNAAKLPVTLALASLWIRKNHA
NSFLVHIIDSLPEFYPKVEAWVEDVIMEEGNATILTLFVCLLTVLYLRERQRRHVAAAGE
VAFPHQLGEQGVPVAN
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatcgaagaatccgaaggttaagctttgctctcctacttctcgcacttctccca
atttctacactcggccgtcaattagtgctcgtcctctctcaagacgacctcgcagaagca
gccggtgattctacaaatctcggcgatgacacgtcagatactggattcgacgatttcatt
gactccgaagcaaagcccgattacgtgctcgatccgggctcatggagcccgattttcgag
cccgctgttgcgcctcacgataaccttggagatgaagggtcgtattataaaacggtgagt
aagatagttaaggcgtcaagcagaggcgatgaaagggcgatggaggaggcggcgtctgag
atcgaagcggctgcatcagctggccacccccacgcgcagtcgattttagggtttttgtac
ggaatgggaattggaagagagaggaataaagctaagtcttttctataccaccattttgct
gctgaaggcggcaatatgcaatccaaaatggcacttgcctacacttattctcgccaagaa
atgcacgataaagctgtaaagttgtatgctgaattggcagaggtagccattaacagtttc
ctgatatcgaaggactcacctgtgattgaaccggtgaggatacacagtggagcagaagaa
aataaggaagccttgaggaagtcacgaggggaggaagatgaggacttccagattttggaa
taccaggcgcaaaaagggaacgctggtgcaatgtacaaaattgggatattctactacttt
ggtttaaggggagtaaggcgcgatcacaccaaggcattatcgtggtttctgaaggcagtg
gagaagggtgaggcaagatctatggaacttcttggggagatttatgcaagaggagctgga
attcaaaggaactttaccaaggcattagagtggcttactcttgcatccaaacaacaactt
ttttctgcttacaatggtttaggctatctccatgtcaaaggatacggagtggaaaagaac
aacactaaggcaaaagagtatttcgagaaggctgcagaaaatggagaggctggtggattc
tacaacctcggagtcatgtttcttaaaggaattggggtgaagagggatgtgaaattagca
ttcaaatatctttcagcggcttttgatgccggtcaaccaaaagcattttatcaactggcg
aaaatgttccaaactggtgtgggttataagaaaaatgttcctctggcaactgccttgtac
aaactagttgcggaacgtggaccatggagttctttgtctagatgggcactagagtcatat
ttgagaggagatgtgggcaaggctttccttttgtattcgcgaatggcagagttaggctat
gagattgcgcaaagtaatgctgcatggatccttgacaaatatggagaaagaagcatgtgt
ttgggagaatctggagtttgcagtgatgaagagaggcatcaacgcgctcatgccttgtgg
tggcaagcttctgagcagggtaatgaacatgctgcattgcttattggagacgcatattac
tatggtcggggtactgagcgggactatgaacgtgcagctgaggcttatatgcacgccaaa
tcccaatctaatgctcaagctatgttcaatcttggttacatgcatgagcatggccaagga
ctaccttttgatcttcatcttgccaaacgctactacgatcaggcactagaaattgataat
gctgcaaaattgcctgtaacattggcccttgcaagcttgtggattaggaaaaaccacgcc
aatagttttttggttcacataattgattcgttaccagaattttatcccaaagtggaagca
tgggtggaggatgtcataatggaggaaggaaatgcaacaattcttaccctatttgtatgc
cttctaacagtgctttaccttcgtgagcggcagcgcaggcatgtcgctgctgctggagag
gttgctttccctcatcaacttggtgagcaaggtgtgcctgtagccaattaa
DBGET
integrated database retrieval system
