Nicotiana sylvestris (wood tobacco): 104229883
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Entry
104229883 CDS
T05026
Name
(RefSeq) polygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Module
nsy_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104229883
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
104229883
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104229883
NCBI-ProteinID:
XP_009780910
UniProt:
A0A1U7X361
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Position
6:complement(16597102..16601896)
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AA seq
402 aa
AA seq
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MDLKFKVNFALLVLLFLAHFGESQTGVFDITKYGANSNADISEALLNAFKEACQSTSPST
IVIPKGTFTMNQVKLEGPCKSPLELQIQATLKAPSDPSQLKVGEWLTVNKIDQFTMSGGG
ILDGQAAAAWECKQSKKCNKLPNNLSFNSLTNSTVKDITTLDSKSFHVNVNQCKNLTFIR
FNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGIS
VGSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPV
VIDQVYCPFNKCNKDLPSQVKISKVSFQNIKGTSRTQDAVSLLCSKGVPCEGIEVGDIDI
TYSGKEGPAKSSCENIKPSLKGKQNPPVCTATAASAPAASSS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaattcaaggtaaattttgcattattggtgttgctatttctagcacacttt
ggggaatctcaaactggagtttttgatataactaaatatggtgctaatagcaatgcagat
attagtgaggcattgttgaatgcttttaaagaagcatgtcaatcaacaagcccaagcaca
attgtgattccaaagggaacatttacaatgaaccaagtaaagctagaaggcccatgcaaa
tccccacttgaacttcaaatccaagccactttgaaagctccttcagatcctagccaactc
aaggttggtgaatggttaactgtaaataaaattgatcagttcaccatgtctggtggtggt
attcttgatggtcaagctgcagctgcttgggaatgcaaacaatccaaaaaatgcaataaa
cttcccaataacttgagtttcaactccctcacaaattccacagtcaaggacataacaaca
ctggacagcaaatcattccatgtcaacgtaaaccaatgcaaaaatctaacattcattcga
ttcaacgtcagtgcaccagccaacagcccaaacacagatggaattcatgtctcgagatcg
agctctgtgaatattacagattcaaatttttctacaggagatgattgtatatcagttggt
gatgaaacagaacaactttatattactagagttacatgtggacctggacatggtattagt
gttggaagtctaggtggaaatccagatgaaaaaccagtggttggagtttttgttaggaat
tgcacttttactaacactgataatggtgttagaattaagacatggcctgcttcacatcct
ggtgttgttaatgatgttcattttgaggatattattgtgcaaaatgttagcaatcctgtt
gtcattgatcaagtttattgcccattcaacaaatgcaacaaagatttgccatcacaagtg
aagatcagtaaagtaagtttccaaaacataaagggaacatcaagaactcaagatgcagtg
tcacttctctgcagtaaaggtgtaccttgtgagggtattgaagttggagacattgatata
acttacagtggaaaagaagggccagcaaaatcaagctgtgaaaatattaagccaagttta
aaaggcaaacaaaatccacctgtttgcactgccactgctgcttctgcgcctgctgcttcc
tcttcttaa
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