Nicotiana sylvestris (wood tobacco): 104230008
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Entry
104230008 CDS
T05026
Name
(RefSeq) uncharacterized protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104230008
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104230008
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104230008
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
104230008
NCBI-ProteinID:
XP_070007084
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Position
7:94296567..94300892
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AA seq
244 aa
AA seq
DB search
MIWGYIDNFVGLKKEQIMVIGKFKFFSLEEREKYCVGVFDEEEMEEHSEKSPPAEDDHCP
ICFGDFTIPCRTNCGHWFCASCILQLWNYRSTLQRCKCPICCRPISKLVPEDSLVVQQEE
DGVELLKNIRRYNHLYVGGAYGVFLKLVALPLLMQRILRSLMSKLMDPDHVKLNCYVLRL
FALLLSWIYSSWKFEFIPTGRLGIWRLLDICAMAFVAIFYLAGLFHRWILRRHVRLAVLQ
AQPS
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgatttggggttatattgataattttgtggggttgaaaaaagaacaaataatggtgatc
gggaaatttaagtttttttctttggaggaaagggagaaatattgtgtgggtgtatttgat
gaagaagaaatggaggaacatagtgaaaagtcaccaccagctgaggatgatcactgtcct
atttgttttggggacttcacaattccttgcaggacaaactgtggccactggttttgtgca
tcttgcatattgcagctatggaattatagatcaacattacagcggtgcaaatgccccata
tgctgtcgtcccatcagtaagctggttccagaggattctttagttgtacaacaggaagag
gatggtgttgaactccttaagaacattcgccgatacaatcacctatatgtaggtggtgct
tatggtgtgtttctgaaactagttgcattgccactgctaatgcagagaattctccggtca
ttgatgagcaaactgatggatcctgatcatgtcaagttaaattgttatgtactgcgcctt
tttgctttattgctgagttggatctacagcagctggaagtttgagtttattcctactgga
cgtctgggaatatggagactacttgacatttgtgctatggcctttgtggccattttctat
ttggctggcctattccatagatggatacttaggcgtcatgtgaggttagctgttttacaa
gctcaaccgagttaa
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