Nicotiana sylvestris (wood tobacco): 104230087
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Entry
104230087 CDS
T05026
Name
(RefSeq) autophagy-related protein 18d-like
KO
K22991
WD repeat-containing protein 45
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsy04131
]
104230087
Membrane trafficking [BR:
nsy04131
]
Autophagy
Other autophagy associated proteins
Others
104230087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_WDR19_1st
WDR55
Beta-prop_EML
Beta-prop_IFT140_2nd
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
104230087
NCBI-ProteinID:
XP_009781125
UniProt:
A0A1U7X3S3
LinkDB
All DBs
Position
5:complement(89806309..89811734)
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AA seq
507 aa
AA seq
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MRTMMVSKTKDPLESAHPKIEITRRTLLSSVVLSSPIFPFNHKSHITNHPPKHLGISLFD
RDIAVASTKFELHQLLPNQHKDFHSFCLHLVMTTLSSPTGSAVSPSRGTLSPAAYGTYES
PMPGASHSGHSEPEISDNDETELHSVSWNQDYSCFAAGTSRGFRVYNCDPFKETFRRDLK
SGGFGIVEMLFRCNILALVGARTNAQYPPNKVIIWDDHQSRCIGEFSFRSDVCAVKLRRD
CIVVVLEHKIYVYNFMDLKLLHQIETVGNPRGLCCLSHHLNTSVLACPGVRRGQVRVEHF
GLNMTKLIKAHDSQIACLTLTMDGLLLATASTRGTLIRLFNTMDGTQLQEVRRGVDKADI
YSIALSPNVQWLAVSSDKGTIHVYSLRVRVVGEDAAADSAVRTPTLLCQNSSNSLDALIS
PSTGANPGSSLSFMKGVLPKYFSSEWSFAQFHLPECTQYIVAFGSQNTVVTAGTDGSFYR
CCFDPVNGGEMVQQEYVRFLKTESRQR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacgatgatggtgtcaaaaacaaaagatcccctcgaatcagcacacccaaaaata
gaaataacccgtcggactcttctctcctcagtcgtgctttcctctccaatctttcccttc
aatcacaagtcacatatcacaaatcaccctcccaaacatctgggcatctctctctttgat
cgtgacatcgcagtcgctagcacaaaatttgagcttcaccaattgctgccgaaccaacac
aaagatttccatagcttctgtttgcatttggtgatgactactctatcatccccaacgggt
tcagctgtctcaccatctcgagggacactttcaccagcagcctatgggacatatgaatcc
cccatgcccggggcctctcattctggccattctgaaccagagatcagtgacaatgatgaa
acagagctacactctgtgtcatggaatcaggattacagttgctttgctgctggcactagc
cgtggctttcgtgtatataactgtgatcctttcaaagagactttcagacgtgatctgaaa
agtggtgggtttggaatagtagagatgttgttccgatgcaacattttagcacttgtcggt
gccaggactaacgcccaatacccacctaataaagttattatatgggatgatcatcagagc
cgatgcattggtgaattttcatttaggtctgatgtttgtgcagtgaaactaagacgggat
tgtattgttgtagtccttgaacacaagatatatgtctacaactttatggatctaaagctt
cttcatcagatagagactgtgggcaatcccaggggactttgctgcctctcacaccattta
aatacatctgtattggcttgcccaggtgttcgaagaggacaggtccgggttgagcatttt
ggcctgaacatgacaaagttgatcaaggcgcatgattctcagatagcatgcttaaccttg
actatggatgggctgcttcttgcaacagcaagcactcggggaactttgataagactcttc
aacaccatggatggaactcagttgcaagaggtgcgtagaggggttgacaaagcagatatc
tatagtattgcactatcaccaaatgtgcagtggttggccgtctctagcgacaaaggtacc
atccatgtgtacagcctaagagtacgtgttgttggcgaggatgctgcagctgattctgct
gttagaactccaacattattgtgtcaaaattcatcaaattctcttgatgcacttatttct
ccaagtactggagccaaccctggttcatcgttgtcttttatgaaaggagttctgccaaag
tactttagctctgaatggtcatttgctcagtttcacttgccagaatgtacccagtacatt
gttgcgtttggttctcagaacactgttgttactgctggcactgatggaagtttctatagg
tgctgctttgatcctgtgaatggaggagaaatggtacagcaggaatatgtccgctttctg
aaaacagagagtaggcagagatag
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