Nicotiana sylvestris (wood tobacco): 104230353
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Entry
104230353 CDS
T05026
Name
(RefSeq) flap endonuclease GEN-like 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104230353
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104230353
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
5_3_exonuc
PHD_G2E3
Motif
Other DBs
NCBI-GeneID:
104230353
NCBI-ProteinID:
XP_009781433
UniProt:
A0A1U7WS68
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Position
1:163367491..163372511
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AA seq
604 aa
AA seq
DB search
MGVVGNFWELLKPYGRAEGFDFLRNKRVAVDLSYWIVQQETAVLKAHIRNPHIRLTFFRT
INLFSKFGAFPVFVADGTASPLKSQARIARFFRASGIKLSSLPAAEEGISIERNKAFQKC
EQECVELLELLGVPVLKAKGEAEALCAQLNQEGQVDACITADSDAFLFGAKCVIKNIQPN
SKEPLEFYHMSDIESGLGLRRNHLIAISLLVGNDHNLIGVPGIGLETALRFVKSFSEDEI
LSRLQEIGRGDVQVLQRDVNLDCNYIPGSDESPWKTKVQHCSFCGHPGSKKAHHKFACQD
CSSTANEGCIQKPSGFKCNCSSCDLDNKEKEQKRNENWQIKVCRMIASEQNFPNNEITEM
YLNKHQQSADGDYHLTWSSPKTDMLVDYLAYYQHWEPSYTRQRMLPMLSTIFLRDVASNS
KDQLLCGQYEFDSIQRVKTRFGHQLYVINWKKTTREMSNEICIPSENPDMEQELRIADDG
SKDLLDEPEVLQIHIKDGCSFLSTEEDMELVQSAFPEKVSQFLRDKELKETKSSRKRSVK
PENSESPRGVQLSITNFYRSSKVQATPGENESRSSKISADTSGERDKEPIRNYSKSARRK
LLFG
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggttggaaacttctgggaattgctgaaaccgtatggtcgagcagaagggttt
gatttcttgagaaacaaacgtgtagcagtggacttgtcatattggatcgttcagcaagaa
actgcagtactcaaagcccacattcgtaatcctcatataagactcacttttttccgtacc
atcaatctcttctctaagtttggggcatttcccgttttcgtcgcagatggtactgcatca
ccgctaaagtctcaggcaaggattgcacgctttttccgggcatcaggaattaaattatcg
agtttgccagcggctgaggagggcatttcaattgaaaggaacaaggcatttcagaaatgc
gaacaagaatgtgtggagcttcttgaactacttggggtgccagtcctaaaagcaaaagga
gaagctgaagcactctgtgcacaattgaatcaagaaggacaagttgatgcttgtattact
gctgatagcgatgcatttctttttggagccaaatgtgttataaaaaatatccaacccaac
tccaaagaaccacttgagttctatcacatgtcagatattgagtctggtcttgggctgagg
aggaatcacttgatagcaatttcacttttggtaggaaatgaccacaacttgattggtgtg
cctggaatcggacttgaaacagcactccgtttcgtcaaatctttcagtgaagatgagatc
ttgtctaggttgcaggaaataggcagaggggatgtacaggtgcttcagcgtgatgtcaac
ttagactgtaattatatacccggttcagatgagagcccttggaagaccaaagtgcaacac
tgttcgttctgtgggcatcctggtagcaagaaagctcaccacaagtttgcttgtcaggat
tgcagttccactgccaacgagggttgcattcagaaaccatcgggcttcaagtgtaattgt
tcctcgtgtgatttggataataaagaaaaagaacagaaaagaaatgagaattggcagatt
aaagtttgcagaatgatcgcctcggagcagaatttcccaaacaatgagattacagaaatg
tacttgaacaaacaccagcagtctgcagatggtgattatcatttaacatggtcaagtcca
aagacagatatgctagttgattatctggcttattatcagcactgggagccatcttataca
cgacaaagaatgcttcctatgttatccaccatatttctaagagacgtggcctcaaattca
aaagatcaattgttatgcggacagtatgaatttgattccattcagcgggtaaagacaaga
tttggacatcaactttacgtaatcaattggaagaaaacgacacgtgaaatgagcaatgaa
atctgcatcccctctgaaaaccctgatatggagcaggagctgaggatagctgatgacggg
tcgaaagatttgctcgatgagcctgaggttctacagattcatatcaaggacggatgcagc
tttttatcaactgaagaagatatggagcttgtacagagtgcttttccagaaaaggtttcc
cagttcttgagagataaggagttaaaagaaacaaaatcaagtagaaaaagatcagtgaag
cctgaaaattcagaatcaccgagaggcgttcaactcagcattaccaacttctaccgatca
tccaaagtccaggcaacgcctggggagaatgaatctcgaagttccaagattagtgcggat
acttctggagagagagataaagaacccatccgaaactactccaagtctgctagacgcaag
cttttgttcggttag
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