Nicotiana sylvestris (wood tobacco): 104230456
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Entry
104230456 CDS
T05026
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104230456
03036 Chromosome and associated proteins [BR:
nsy03036
]
104230456
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104230456
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104230456
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
104230456
microRNA pathway
RISC loading complex
104230456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
104230456
NCBI-ProteinID:
XP_070006257
LinkDB
All DBs
Position
6:4841325..4857251
Genome browser
AA seq
941 aa
AA seq
DB search
MPQWQMKDPEQKHMVSRTPLKESLNQNAQPQISGERRIEEVKRNNNAGRRRSRRKGKGIL
VEKMQDINDSQTSTPCSASSSERSLVFPHRPGYGQLGTKCMVKANHFIAELSERSLSQYS
VKITPEVKCTRLNKAVMAELVKLHKDSDLGKRIPVFDGRRTLYTAGLLPFNAKDFSIVLA
DDDEWIGITKERTFTVTIKFMSQANLLPLRELLSGKQVDSPPQALKIIDIVLRELASQRY
ISVGRFFYSPNIKKPQTLGNGLQSWRGFYQSIKPTQMGLSLNIDMSTTAFIEPLPVVEFV
AQVLGKDVSSRPLSDADRVKVKKALRGVKVEVTHRGNIRRKYRISGLTSQPTRELIFPVD
EEKNMKSVIEYFQEVYGFTIQYPHLPCLLVGSQKKVNYLPMEACKILEGQRYTKRLDEKQ
ITSLLKSSCQRPREQEMDILQTIRQNGYKHDPIAKEFGISIDDKLATVEARVLPAPWLKY
NDSGKEKECHPQLGQWNMVNKKVINGSTVNHWACINFSCNVQENAARGFCHQLAQMCQVS
GMEFNCEPVVPIYSARPDQAKKALSYVYNAAANKLGGKELELLIAILPDNNGSLYGSLKK
ICETDLGLISQCCLTKHVLKISKQYLSNVSLKINVKMGGRNTVLLDALRWKIPLVSDIPT
IIFGADVTHPESGEDCSPSIAAVVASQDWPEVTKYAGLVCAQPHRQELIQDLYRTWQDPQ
RGTMSGGMIRELLLAFKKATGQKPLRIIFYRDGVSDGQFYQVLLYELDAIRKACASLEPG
YQPPVTFIVVQKRHHTRLLPNNHNDRNHTDRSGNILPGTVVDTKICHPTEFDFYLCSHAG
IQGTSRPAHYHVLWDENNFTADEMQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARC
YVEPDSHGNGSKRSTRTTNGSVNVRPLPALKEKVKNVMFYC
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagtggcaaatgaaagatcctgagcaaaagcatatggtttcaagaactccatta
aaagagtcgttgaatcagaacgcgcaaccccaaattagtggagagcgtagaattgaagaa
gtcaagagaaataataatgcggggaggagaaggagcaggaggaaaggaaaagggatatta
gtcgaaaaaatgcaggatataaatgattctcagactagtaccccttgttctgcttcatca
tccgaaagaagtctcgtgtttcctcataggccgggatatggccaactcggtactaagtgt
atggtaaaagccaaccatttcattgctgaattatcagaaaggagcttaagccaatatagc
gtaaaaattactccggaagttaaatgtacaagattgaacaaggctgttatggctgagttg
gtaaaacttcataaagattccgacttgggtaaaagaattcccgtttttgatggaagaaga
acactttatacagcagggttgcttccctttaacgcaaaagatttcagcatcgttcttgct
gatgatgacgaatggataggaatcacaaaggagcgtacgtttactgttacaatcaagttc
atgtcacaagcaaacttgcttccgctacgcgaacttctttctgggaagcaagttgacagt
cctccacaagcacttaaaattattgatattgtgctccgggagctcgcttctcaaaggtac
atatcagttgggagatttttctattctcctaatattaagaagccacagacactaggtaat
ggcttacagtcttggaggggtttctaccagagcataaaacctactcaaatgggattgtca
cttaatattgatatgtcaacaacagctttcattgaaccactcccagttgttgaatttgtt
gctcaagttttgggaaaagatgttagttcaaggccactgtccgatgcagatcgagtaaag
gttaagaaggctctcagaggtgtcaaagttgaagttacacataggggaaatattcgaagg
aaataccgaatttctgggttgacatcacagccaacaagagagctaatttttccagttgat
gaagaaaagaacatgaaatcggtcatcgagtatttccaagaggtgtacggatttaccatt
cagtatcctcatttaccttgtctcctcgtgggaagccaaaagaaagtaaattacttaccg
atggaggcttgtaagattcttgagggacaaagatacaccaaaaggctggatgagaaacag
atcacatcactattaaaatcgtcatgccaacgaccacgagaacaagaaatggatattttg
cagaccattcgccagaacggatacaaacacgatcctatagcaaaggagtttggcataagc
attgatgataagcttgcaacagttgaagctcgagttctcccagccccgtggttgaagtac
aatgattcagggaaggaaaaggaatgtcatccacagctaggtcagtggaacatggtaaat
aagaaagtaattaacggaagtactgtaaaccattgggcttgcatcaacttctcatgtaat
gtccaagaaaatgcggcccgtggattttgtcatcagcttgcccagatgtgccaagtttct
ggaatggaatttaattgtgagccagtggtaccgatttatagtgcaagaccggatcaagca
aagaaggcactgagttatgtatataacgctgctgcaaacaaacttggaggaaaagaattg
gagttgctaattgccattcttcctgacaacaatggttctttgtatggttctctgaagaaa
atttgtgagacagatttggggctgatttctcagtgttgtcttacaaagcatgtattaaag
attagcaagcaatacctgtcaaatgtatcgctgaaaatcaatgtgaagatgggaggaaga
aatactgtgcttttagatgctttgaggtggaaaattccacttgtcagtgatattccaact
attatatttggtgcggacgtgactcatccagaatcgggagaggattgtagtccatcaatt
gcagctgttgtagcatcacaagattggccggaagttactaaatatgcaggtttggtatgt
gctcagcctcatagacaagaactcattcaggatctttatcggacctggcaagatcctcaa
cggggaacaatgtccggagggatgattagagaacttttgttggcattcaagaaagccaca
ggacaaaaaccactgagaataatattctacagggatggtgtcagtgatggacagttttat
caggtcctactttatgaactcgatgcaattcgtaaggcttgtgcatctcttgaaccaggt
taccaacctccagtaacgttcatagttgtccaaaaacgtcaccacacacgacttttgcca
aacaatcacaatgatagaaatcatactgacagaagtggaaacatcctacctggtactgtg
gttgatactaaaatttgtcatcccactgaatttgatttttacttatgtagtcatgctgga
attcagggaactagtcgtcctgcacactatcatgttctctgggatgaaaacaattttact
gcagatgaaatgcagtctttgactaacaacctttgctatacatatgctcgatgcactcga
tctgtttctgtagttcctccggcatattatgctcatttggcagcctacagagcacgttgc
tacgtagaacctgactcgcatggcaatggttcaaagcgtagcacacgtacaacgaatggt
tctgtcaacgtccgtcctctaccagcattgaaagagaaggtgaagaatgtgatgttctat
tgctag
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