Nicotiana sylvestris (wood tobacco): 104230973
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Entry
104230973 CDS
T05026
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104230973
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nsy01007
]
104230973
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsy03016
]
104230973
Enzymes [BR:
nsy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
104230973
Amino acid related enzymes [BR:
nsy01007
]
Aminoacyl-tRNA synthetase
Class II (U)
104230973
Transfer RNA biogenesis [BR:
nsy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104230973
Prokaryotic type
104230973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
EAD7
Motif
Other DBs
NCBI-GeneID:
104230973
NCBI-ProteinID:
XP_009782194
UniProt:
A0A1U7X5N2
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Position
11:complement(95387389..95408604)
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AA seq
592 aa
AA seq
DB search
MPTVSVGRDRLFEALGCTYTYEEFDELCFKFGIELEEATTEKAMQRKEKHLEEEATEDDG
EIIYKIEVPANRYDLLCLEGLAQALRIFGGLDPIPTYKVANVGKESMLEMRVGKETSKIR
PYVVCAVLRGVTFDEARYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTIEGPFTYEALPP
SEINFVPLKQTRNFRADELMEFYKSDLKLKKFLHIIENSPVYPVIYDCKRTVLSLPPIIN
GAHSAITLKTKNVFIECTATDLTKANVVLNTMVTMFSVYCERKFEVEPVKVTYPDGKSFV
YPDLSIYNMNVPLSYITGIIGVQLPENEVASLLHKMQLRAVESVSENAEVKFVVSVPPTR
SDVLHPCDVAEDVAIAYGYNEIPKRRPASLKPLPLSQFSDLIRSEIAMAGYTEVLTWILC
SKKEISSMLNCEEDKSAVIIADSRTSEFEVVRTNLMPGLLRTVGHNKDHPKPMKIFEVGD
VVLLDGTKDVGAVNRRHLAALYCGANSGFELIHGLVDRIMEATRTSFVSPGDCEGYYIER
SEEPAFLQGRQAKIVYKGNRIGTFGIVHPKVLKEFDIPDPCSFVELDMQSFL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccgtcagcgttggaagagaccgtctgttcgaagccctaggctgtacttatacc
tatgaagaattcgacgaattgtgctttaagttcggtattgagctcgaggaggctacaaca
gaaaaagcaatgcaaagaaaagagaagcatctggaggaagaggcgactgaggatgatgga
gagattatatacaaaattgaagttccggcaaacagatatgatttgctttgtcttgaaggg
ctagctcaagctctccgaatatttggtgggcttgatccgatccctacatataaggtggca
aatgttggtaaagaatctatgcttgaaatgcgtgtcggaaaagagacatccaagattcgc
ccatatgttgtgtgcgctgtcttaagaggtgtaacatttgacgaggctaggtacaatagc
ttcattgatctacaagataagctgcatcagaacatttgcaggcgaagaaccttggtggca
attggtacccatgacctagatacaattgaaggacctttcacatatgaggctttgcctcct
tcggaaattaattttgtgccattaaagcagaccagaaacttcagagctgatgagctgatg
gaattttacaaatcggatttgaagttgaagaagtttctgcacataatcgagaattcacca
gtgtaccctgttatatatgattgtaaaaggactgttttgtctttgccccccattatcaac
ggtgcacattcggccattacattgaaaacaaagaacgtgtttatagaatgtacagccaca
gatttgacgaaggccaatgttgttttgaacacaatggtaactatgttttcagtgtactgt
gagcggaagtttgaagttgaaccagttaaagtaacatatcctgatggaaaatcatttgta
tatcctgatctctcaatctacaatatgaacgtgcctttgtcctacatcactggcatcatt
ggagttcaattgccagagaatgaggtggctagtttgttgcataaaatgcaattgcgtgca
gtggaatctgtctcagaaaatgcagaagtcaagtttgtcgtatcggtacctcccacaaga
agtgatgtccttcatccttgtgatgtagcggaggatgttgcaattgcttatggctacaat
gagatcccgaagagaagacctgcatcattgaagcctttacctctcagtcaatttagtgat
ctaattcggtcggagattgcaatggctggttatacggaggtcctaacatggatcttgtgt
tccaagaaagaaatttcttctatgttgaactgtgaagaggataagtctgctgtaatcatt
gctgattctcgtacatctgaatttgaggttgtgcggactaatctcatgcctggattattg
agaaccgttggacataacaaggaccatccaaagccgatgaagatttttgaagttggtgat
gtagtcctgttagatggcacaaaggatgttggtgcagtaaaccgtcgccaccttgctgct
ctgtattgcggcgctaactcaggatttgagctaatacatggtctagtcgacagaatcatg
gaagcaactagaacttcttttgtatcacctggggactgtgaaggttactacatagaaaga
tcagaggagcctgcatttcttcagggaagacaagctaaaattgtttacaaaggaaatcga
attggaacattcggaattgtgcaccctaaggtcctcaaggaatttgacatcccagatcca
tgctcctttgtggagcttgacatgcagagtttcttgtaa
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