Nicotiana sylvestris (wood tobacco): 104231135
Help
Entry
104231135 CDS
T05026
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104231135
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nsy01002
]
104231135
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104231135
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104231135
Peptidases and inhibitors [BR:
nsy01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104231135
Ubiquitin system [BR:
nsy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104231135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
SASP
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
104231135
NCBI-ProteinID:
XP_009782385
UniProt:
A0A1U7X7C3
LinkDB
All DBs
Position
5:155604871..155626807
Genome browser
AA seq
1116 aa
AA seq
DB search
MTLMTPPPVDPEEDEMLVPNSDFPVEGPQPMEVATADTASTVDGPPVDDPPSARFTWTIE
NFSRLNTKKLYSDVFHVGGYKWRILIFPKGNNVDHLSMYLDVADSLALPYGWSRHAQFSL
AVLNRVHNKFTVRKDTQHQFNARESDWGFTSFMPLSELYDPIRGYLVDDTVIVEADVAVR
RVIDYWSHDSKKETGCVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDNPSGSI
PLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
NKYHAEKYGLQDARKGVLFIDFPPVLQLQLKRFEYDFVRDTMVKINDRYEFPLELDLDRE
NGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDSK
RALEEQYGGEEELPHANPGFNNSPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEHL
RVRLKKEQDEKEQKRKEKAEAHLYTIIKVARDEDLGEQIGKEIYFDLVDHDKVRSFRIQK
QMAFTQFKEEVAKELGIPVQFQRYWLWAKRQNHTYRPNRPLTPQEEAQSVGQLREVSNKA
NNAELKLFLEVEFGLDLRPCPPPEKTKEDILLFFKLYDPLKEEMRYVGRLFVKGSGKPLE
ILPKLNELAGFSPDEEIELFEEIKFDPNVMCEPIDWKLTFRGSQLEDGDIICFQKPLRSQ
TSEQYRFPDVPSFLEYVHNRQVVRFRSLEKPKEDDFSLELSKRNNYDEVVERLARHLGLD
DPSKIRLTSHNCYSQQPKPQPIKYQGVDRLTEMLVHYNQTSDILYYEVLDIPLPELQCLK
TLKVAFYNSAKDEVTIHTIRLPKQSTVDDVLNHLKTKVELSHPDAELRLLEVFYHKIYKI
FPPTERIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDTTQNQAHVQNFGEPFF
LVIHEGETLTEVKARIQKKLQVPDEEFSKWKFAFLSMGRPDYLQDSDVVSNRFQRRDVYG
AWEQYLGLEHADNAPKRSYASNQNRHTFEKPVRIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatgactcctcctccagtagacccagaagaggacgagatgctcgttcctaat
tcagattttcctgttgaaggtcctcagccaatggaagttgcgactgcggatacagctagt
acggtggatggaccgccagtggatgatccgccatctgctcggttcacatggacaatagaa
aacttttcaaggttgaatacaaagaagctatactcggatgttttccatgtgggaggatat
aaatggaggatattgatatttcctaaagggaacaatgtggaccatttgtcaatgtattta
gatgttgcggattcactggcattgccttacgggtggagtagacatgctcagtttagctta
gctgttctcaaccgagtccataacaagtttacagtgaggaaagatactcaacaccagttt
aatgcaagagagagtgactggggtttcacgtccttcatgcctcttagtgaattatatgat
cctatcagaggttatcttgtggatgatacagtaatagttgaagctgatgttgctgtgcgt
agggtcattgattactggtctcatgactcgaagaaggaaactggttgtgttggccttaag
aatcagggagctacttgttatatgaactctctcctccaaacattgtaccatattccttac
tttagaaaggctgtgtatcatatgccaacaactgagaatgacaatccatccgggagcatc
cctttggctctacagagtttgttttataagctacaatacagtgacactagtgtagcaaca
aaagagttgacaaagtcctttggatgggatacatatgattctttcatgcagcatgatgta
caagaactcaacagggttctttgtgaaaaacttgaagataagatgaagggaaccgttgta
gagggcacaatacaacaattattcgaggggcatcatatgaattatattgaatgtatcaat
gtggactataaatcaacaagaaaagaatctttttatgatttgcagcttgatgtcaaaggg
tgtcgtgatgtctatgcttcttttgacaagtatgttgaagtagaacgccttgagggtgat
aataagtaccatgcagaaaaatatggtttacaggatgctcgaaaaggtgtacttttcatt
gatttccctcctgttcttcagcttcaattaaaacgatttgaatatgattttgtgcgggat
actatggtcaagataaacgacagatatgagtttcctttagaactcgatcttgatagagag
aatggcaaatacttatctcctgatgcagatcgaagtgttcgcaatctctatacgcttcac
agtgttctggttcacagtggtggggtccatgggggacactattatgcttatatcaggcca
acactctctgatcaatggtttaaatttgatgatgagcgtgtgacaaaagaagattcaaag
agggctttggaagaacaatatggtggtgaggaggagttacctcatgcaaaccctgggttc
aacaattcaccattcaaatttacaaaatattcaaatgcatatatgcttgtttatatacgt
gaaagtgacaaagaaaagattatctgcaatgtggacgaaaaggacatagcggagcatctc
agggtaaggctgaagaaagagcaagatgaaaaggagcaaaagagaaaggaaaaagcagag
gctcacctttatacaataatcaaggttgctcgtgatgaagaccttggcgaacaaattgga
aaagagatttattttgatcttgtggatcatgacaaagtccgtagtttccgtatccagaaa
cagatggcatttacacaattcaaggaggaagttgctaaggaattgggtataccggtgcaa
tttcagcgttattggctatgggcaaaacgacaaaaccacacttatcggcctaatcggcca
ttgacacctcaagaggaagctcaatcagttggacaactgagggaggtctctaataaagca
aataacgctgagctaaaactgtttttggaagttgaatttggcctggatttgcgaccttgt
cctccacctgagaaaaccaaagaagatattcttctatttttcaaactgtatgaccctctg
aaagaggagatgaggtatgttgggcggctctttgtaaaaggtagtggcaagccattggag
atattgcccaagctaaatgagctggctggcttttcgcctgacgaagagattgaactcttt
gaggaaataaaatttgatcccaacgtgatgtgtgaacccattgattggaagctaacattt
cgtggcagtcagcttgaagatggggacattatctgttttcagaaaccccttcgaagtcaa
actagtgaacaatatcgatttcctgacgttccttcatttttagagtacgtgcacaatcgc
caggttgttcgcttccgctcattggaaaaacccaaggaggatgatttcagtcttgagttg
tcgaagcggaacaactatgatgaagtagttgaaagattggctcgccatcttggcttggat
gatccatcaaaaataaggcttacatcacataactgctactcacagcaaccaaaacctcag
ccaataaagtatcaaggagtggaccgtcttacagaaatgcttgttcattataatcagact
tcagacattttgtattatgaagtcctcgatattccgttaccagagctgcagtgcttaaaa
actctcaaagtcgccttctataattctgcaaaagatgaagtgacaatccatactattaga
ttgccgaaacaaagtactgtagatgatgtccttaatcatctcaagacaaaggttgagttg
tcacatccagatgctgaactaagattgctggaagttttctaccacaaaatatataagatt
tttccacctactgaaaggattgagaacataaatgatcaatactggaccttgcgtgcagag
gagatccccgaagaggagaaaaacctgggtcctcatgatcgcttgattcatgtttaccat
tttatgaaggacacgactcaaaatcaagcacacgtacaaaactttggggagccctttttc
ctggttattcatgagggtgagacactgactgaagttaaagcccgcattcagaaaaaattg
caggttccagatgaggagttttctaagtggaagtttgcgtttttgtccatgggccgtcct
gactatctccaggattcagatgttgtgtccaatcgctttcagaggagagatgtttatggt
gcttgggagcagtatcttggattagagcatgctgacaatgctcctaaaaggtcatatgct
agcaaccagaaccgacatacttttgagaagcctgttcggatctacaactaa
DBGET
integrated database retrieval system
