Nicotiana sylvestris (wood tobacco): 104231441
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Entry
104231441 CDS
T05026
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104231441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104231441
03036 Chromosome and associated proteins [BR:
nsy03036
]
104231441
Transcription machinery [BR:
nsy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104231441
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104231441
PBAF complex
104231441
GBAF(ncBAF) complex
104231441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Phage_GPO
Motif
Other DBs
NCBI-GeneID:
104231441
NCBI-ProteinID:
XP_009782744
UniProt:
A0A1U7X779
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Position
4:complement(180875150..180878822)
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AA seq
526 aa
AA seq
DB search
MAETGDSKSPAANPNPETTSPPPPPPPPPTLQQPQTSSQPQLQPPPQTPSQPLPPPQQPQ
SELLPPKRPQQLESSPNPTTDSKDVTPATLSSRLTEPDYIYIPSHSRWFSWNSIHESEVR
FLPEFFDGRSPSKNPRTYKYYRNSIIRRFRDNPTKKITFTEARKTIIGDVGSIRRVFDFL
ETWGLINYTANSSKSLLKWEEKESKSTSSASAAPQNADVNGTTPTDFTAPKKRLCSACKS
ACSIACFVSDKYDLTLCARCYVRGNFRVGMNTSDFRRVEISEEVKTDWTDKETLHLLEAL
MHYGDDWKKVAEHVGGRSAKECVARFVKLPFGEQFMGPPVSAEVDNEPGSETMLLPSKRM
RLTPLADASNPIMAQAAFLSALAGKEVAELAAHAAVTALSENSEGIMKGSLASLPGVLEK
QETDGTSNGHAKDTLERALVEARSQLEEEAQDIERAVSEVAIETREIEDKIARFEEHDLQ
MEKEWQQLMQLKNLIFFDQLTLLLNKVGATKAGEAIGEEVMNVKAE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaccggcgacagcaagtcaccggcagctaatcccaaccctgaaactacctct
ccgccaccgccaccgccaccgccacctacacttcaacagccgcagacatcgtcacagcct
cagctgcaaccaccgccacaaacgccgtcacagccactgccaccaccacagcaacctcaa
tctgaacttttgcccccaaagcgtccccaacaactggaatcctccccaaacccaaccacc
gattccaaagacgtgactcccgctaccctctcttcccgccttactgagcctgattatatt
tacatccccagtcactcccgttggttttcgtggaatagcatacatgaaagtgaggttcga
tttcttcctgaatttttcgacggaagatcaccttctaagaaccctaggacttataaatac
tataggaattccattattcgtagattcagagacaatcccactaaaaaaataacctttact
gaggctcgcaagaccattattggtgatgtgggttccattcgtagggttttcgatttcctg
gagacatggggcttgattaattacactgctaactcttccaaatcgctgctcaagtgggaa
gaaaaagagtctaagtctacttcttctgcttccgcggctccgcaaaatgctgatgttaat
ggaactactcccactgattttactgcccccaagaagagactttgcagtgcctgcaaatca
gcttgcagcattgcctgttttgtttctgataagtatgatttgactctttgtgcaagatgc
tacgttcgtggtaatttcagagtcggcatgaatacttcagattttcggcgcgttgaaatt
agtgaagaagttaagacagattggaccgacaaagagactttgcaccttttagaagctctt
atgcattatggcgatgattggaagaaggttgccgagcatgttggtggcagaagtgcgaaa
gaatgtgtggctcgatttgtgaagcttccttttggtgagcagtttatgggccctccggtg
tctgcagaagtggataatgaacctgggtctgaaactatgcttcttccatccaagagaatg
cgcctcacaccccttgctgatgctagcaacccaattatggctcaggctgctttcctttct
gctctagcgggaaaagaggttgcagaattagcagcacatgccgctgttacggctttgtct
gagaacagtgagggaataatgaaagggagtctagcatctctacctggtgtcttggagaag
caagaaacggacggaacttccaatgggcatgccaaggatacacttgaaagagctcttgtt
gaagcacggtctcagcttgaggaggaggcacaggacatagagagagctgtctccgaggtt
gctatcgagaccagggagattgaggacaaaattgctcgttttgaggaacatgatttacag
atggaaaaggagtggcaacagctgatgcagcttaagaacctaatcttcttcgatcaactt
actttgctgctaaataaagttggtgctacaaaagctggagaagccattggggaggaggtg
atgaatgttaaggcagaatga
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