Nicotiana sylvestris (wood tobacco): 104231715
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Entry
104231715 CDS
T05026
Name
(RefSeq) serine/arginine-rich splicing factor RS31 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104231715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsy03041
]
104231715
Spliceosome [BR:
nsy03041
]
Common components
Common spliceosomal components
SR proteins
104231715
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_3
SET_assoc
RRM_Nup35
RRM_8
Motif
Other DBs
NCBI-GeneID:
104231715
NCBI-ProteinID:
XP_009783066
UniProt:
A0A1U7X078
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Position
8:29070668..29074115
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AA seq
240 aa
AA seq
DB search
MRPIFVGNFEYDTRQSELERFFSKYGRIERVDMKSGFAFVYFEDERDAADAIRGTDNMPF
GYERRCLSVEWAKGERGRHRDGPKSGGNQRPTKTLFVINFDPTCTRTRDIERHFEPYGNV
LHVRIRRNFAFVQFENQEDATRALECTHMSKILDRVVSVEYALKDDDERGDRYDSPRRDY
GRQRDSPYRRSPSPMYRRGRPSPDYGRPHSPVRNGPSYDRYNSPDYGRYRSRSPVRRSRT
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctattttcgttgggaactttgagtatgatactcgacaatcagaactggaacgg
tttttctccaagtatggaagaattgagcgagtcgacatgaaatctgggtttgcttttgtc
tactttgaggatgagagagatgcagcagatgccatccgtgggactgacaacatgccattt
gggtatgaaaggcgctgtctatcagtggaatgggcaaaaggtgaacgtggtagacaccgt
gatggccctaagtctggtggaaaccagagaccaaccaaaacattgtttgtcataaacttt
gaccctacttgtactagaacccgagacatagaaagacactttgaaccgtacggcaatgtc
cttcatgttcgcatacgtcgcaattttgcgtttgtgcagtttgaaaatcaggaggatgca
acaagagctttggagtgtacacacatgagtaagatcttggacagagtggtttctgtagag
tatgccttgaaggatgacgatgagagaggggacagatacgacagccctagaagagattat
ggcaggcaaagggatagcccttatcgaaggtcaccaagcccgatgtatcgcaggggccgg
cctagtccagattatggccgacctcatagtcctgttcgtaatggtccatcatatgacaga
tacaatagtccagattatggaaggtatcgcagcaggtctcctgttcgaaggtcgagaact
tga
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