Nicotiana sylvestris (wood tobacco): 104231913
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Entry
104231913 CDS
T05026
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104231913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104231913
03036 Chromosome and associated proteins [BR:
nsy03036
]
104231913
Transcription machinery [BR:
nsy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104231913
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104231913
PBAF complex
104231913
GBAF(ncBAF) complex
104231913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Histone_HNS
Motif
Other DBs
NCBI-GeneID:
104231913
NCBI-ProteinID:
XP_009783278
UniProt:
A0A1U7WXE8
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MSVNNNNNPNKNMGGSSSFGNSPPSNPIAHLQSQSQPQQQMPSGFPGSFQLSQLTAAHAQ
AIAQAQSKVQAHAQAQAQAAHAQFQAQLQAQGLSLNQAHALGNFGSASASAKRMPQKPPV
RPPAFAAANTMSPMRTMELSSAARRKKQKLPEKHLHEKVAAILPESALYTQLLEFESRVD
SALARKKVDIQEALKNPPTIQKTLRIYVFNTFANQIRTIPKKPNAEPPSWTLKIVGRILE
EGMDPDQAAMFQKSSSMYPKFSTFFKRVTISLDQKLYPDNHIIIWDSARSPAPQDGFEVK
RKGEQEFTVNLRLELNYMPEKYKLSPALTEVLGIEVETRARIISSIWHYVKARKLQNPDD
PSYFNCDPPLQKVFGEGKVKFTAVTQKITPHLSPPQPIHLEHRIKLSGNNPAGTACYDVL
VDVPFPIQRELNALLANTEKTKEIEACDEAICGAIRKIHEHRRRRAFFLGFSQSPIEFIN
ALLESQTKDLKVVAGEASRNAEKERRSQFYSQPWVEDAVIRYLNRKPASDAPGSG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttaacaacaacaataaccctaacaagaacatgggaggatcatcctcctttggc
aattcacctccttcaaacccaattgcacacctacaatcccaatcacaaccccaacaacag
atgccctccgggtttcccgggtcatttcagttatctcagctcactgcagctcatgcccaa
gccattgctcaagcacagtcgaaagtccaagctcatgctcaagctcaagcacaagctgcc
catgctcaattccaggctcagttacaagctcagggtctgtcccttaaccaagcccatgct
cttggcaattttggttctgcaagtgcctccgcgaaacgcatgcctcagaaacctccggtg
cgcccacctgcattcgcggctgctaacacgatgtccccaatgagaactatggagctttcg
tctgctgcgagaaggaaaaagcagaagcttcccgagaagcacttgcacgagaaggtggct
gcgattttacccgaatctgcactttatactcagctccttgagtttgaatctcgggttgat
tctgccttagcaagaaagaaagttgacatccaggaggctttgaagaatccgcctactatt
cagaagacgcttcgtatatatgtattcaatacttttgctaatcagattcgtactattcct
aagaagccgaatgctgaaccgccttcgtggacccttaaaatcgtaggaaggattttggag
gagggaatggatcctgatcaagctgccatgtttcagaaatcgagctccatgtatccaaag
ttttcgactttcttcaaaagagtcaccatttccttggaccagaaactgtatcctgataac
catattataatctgggattctgcgagatcgcctgcacctcaggatggtttcgaggtcaaa
agaaaaggagagcaagaattcactgttaatttaagactagaattgaattacatgcctgag
aaatataaactttcaccggctttaactgaagttcttggtattgaggtcgagactcgtgca
agaattatctcttctatctggcattatgttaaggctcgaaagttgcagaaccctgacgat
ccttcttacttcaactgtgatcctcctcttcagaaagtgtttggggaaggaaaggttaag
ttcactgcagtcacacaaaagatcacgccccatttgtctcctccacaacccatacatttg
gaacacaggattaaactttccggaaataatcctgctggaactgcgtgctatgatgtattg
gttgatgtgccattccctatccagagggagctgaatgctctgctggccaatacggaaaag
accaaagagattgaagcttgtgatgaagcaatttgtggtgccataagaaagatccatgag
catcggaggagaagggctttttttcttggctttagtcaatctcctattgagtttattaat
gcacttctagaatcccagaccaaggatctgaaagttgttgctggggaggcgagtcgcaat
gctgagaaagagcgacggtctcagttttatagccaaccatgggttgaggatgctgttatt
cgctacctgaatcgcaagccagcttctgatgcccctggaagcgggtga
DBGET
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