Nicotiana sylvestris (wood tobacco): 104231983
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Entry
104231983 CDS
T05026
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104231983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104231983
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
104231983
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
104231983
NCBI-ProteinID:
XP_009783377
UniProt:
A0A1U7WTY2
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Position
11:complement(105718364..105724175)
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AA seq
200 aa
AA seq
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MVTSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYTKEGMRTSVDGILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGLQPDWQIGECVATWW
RPNFETIMYPYCPPHISKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFNMIQP
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgtcagctatagtgaacacatacccgctctctagctatacctttggcacaaaa
gagcctaaaatggagaaggacacttccgttgccgatcgccttgctcgcatgaaactcaac
tacacgaaggaggggatgaggacaagtgttgatggaattctcttggtacaagaacataat
catcctcatattcttctcctgcaaatcgggaacacattttgcaaacttccaggtggacgt
ctaaagcctggagaaaatgaaatcgagggtttgaaaaggaaactctccagtaaactcgca
gctaattctcctggccttcagccagattggcagataggtgagtgtgtggccacctggtgg
aggccgaactttgaaaccataatgtatccgtactgccctccacacatatcaaaaccaaag
gagtgtaagaagctcttcattgttcacctttctgaaagagagtactttgcggtccccaaa
aacctaaaacttcttgctgtgccattgtttgaactttacgacaatgttcagagatatgga
cccgtgatatccacaatccctcaacagctttccagattccagttcaacatgatccagcca
tag
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