KEGG   Nicotiana sylvestris (wood tobacco): 104232375
Entry
104232375         CDS       T05026                                 
Name
(RefSeq) RING-H2 finger protein ATL40-like
  KO
K19038  E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nsy04121]
    104232375
Enzymes [BR:nsy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104232375
Ubiquitin system [BR:nsy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    104232375
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-ANAPC11 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-RING_16 zf-RING_6 zf-C3HC4_3 zf-RING_10 zf-RING-like DUF6728 zinc_ribbon_16
Other DBs
NCBI-GeneID: 104232375
NCBI-ProteinID: XP_009783867
UniProt: A0A1U7YX35
LinkDB
Position
8:9574512..9575657
AA seq 242 aa
MGFDEDDNPFTHHHKNKYDINSKIMLSAIISLSIVVFLVTILHMYIRCVIRRRQARRRAT
FSPAWSLVASTVSQVEPPKNGLDPSIIASLPIFVYKQSDDHDMDEAITNPIECAVCLSIL
ENGEIVRNLPNCKHIFHVECIDKWFNCHSTCPICRAEAKPQILPEPREGVVSRIPPSAPP
LDGGNLSIVVNVGETSSSGKTTVGGCGSSSRLSSFRRILSRERSSRRLQVEDPESNNGGC
RI
NT seq 729 nt   +upstreamnt  +downstreamnt
atgggctttgatgaagatgataatccatttactcatcaccacaaaaacaaatatgatatc
aacagcaaaattatgctaagtgccataatttcactatccatagttgttttcctcgttact
attctccatatgtacattagatgtgtcattagacgacgtcaagctagacgccgagctacg
tttagccctgcgtggagcttggttgcaagtactgtgtcacaagttgagccaccaaaaaat
ggacttgatccatctattatagcttcacttccaatatttgtttacaagcaaagtgatgac
catgacatggatgaggcaattactaatccaattgagtgtgcagtttgtttgagtattctt
gaaaatggtgaaattgttagaaatttgcctaattgcaaacacatttttcatgtggagtgt
attgacaaatggtttaattgtcattctacgtgtcctatatgtcgagctgaggcaaaacct
cagatattgcctgagcctagggagggtgttgttagtcgtattccgccgtcagcgccgcct
ttggacggtggaaatttgtctatagttgtgaatgttggagagacttcatcatcaggtaaa
actactgttggtggttgtggatcaagctcgagattgagctcgtttagaaggattcttagc
agggagagatcatctcgacgacttcaagttgaagatccggagagcaataatggcggatgc
agaatttaa

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