Nicotiana sylvestris (wood tobacco): 104232633
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Entry
104232633 CDS
T05026
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Module
nsy_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104232633
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104232633
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Nab2-zf4
Motif
Other DBs
NCBI-GeneID:
104232633
NCBI-ProteinID:
XP_009784191
UniProt:
A0A1U7X3C8
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Position
10:complement(14919442..14922041)
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AA seq
395 aa
AA seq
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MKMENPIFSLLLISLLSIFFTKTIADIVTLNVLNFGAKPDGKTDSTNAFLTAWAAACDSS
KPATIFVPQGKYLVKQAHFKGKCKNRAITFQIDGTFIAPSDYNVIGNSKNWLLFQGVDGV
SIHGGILDGQGNGLWACKASGKNCPSGATTLGFSNSNNIAITGLTSLNSQMFHIVFNGCK
NVKLQAVKGFASGKSPNTDGIHIQLSSDISILNSKISTGDDCISIGPGTTNLWIQNMACG
PGHGISIGSLGKDFQEAGVQNVTVKSVTFKNTQNGVRIKTWGRPSTGFVKNVIFQHATMI
NVQNPIVIDQNYCPYNKNCPGQVSGVTISDVTYQDIHGSSATRVAMKFDCSKRNPCRGIK
LEDVDLTYQNQPAAQASCANAAGTTSGVIQPTSCL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggagaaccccattttttctcttcttcttatttcacttctctccattttcttc
actaaaaccatagctgatattgtgacattgaatgttctaaattttggtgcaaaaccagat
ggaaaaactgactcaacaaatgcttttttaactgcttgggcagcagcttgtgactcttca
aaaccagccaccatatttgtcccacaaggaaagtatttggttaaacaagcacattttaaa
ggaaaatgcaagaatagagccataacattccaaattgatggcacatttattgcaccctcc
gattataatgtgattggaaattccaaaaattggcttttatttcaaggtgttgatggagtt
tccattcatggtggaattcttgatggccaagggaatggtttgtgggcttgcaaggcctca
ggcaagaactgcccgagcggcgctacgactctgggattttccaactcaaacaatatagca
ataacaggactaacttcattgaacagtcaaatgtttcacattgtcttcaatgggtgcaaa
aatgtgaagttgcaggctgtcaaaggttttgcctctggcaaaagcccgaatactgatggt
attcacattcagttatcatctgacatctcgattttaaactcgaaaatcagtaccggagat
gattgcatctccattggtcccggaactactaacttgtggatccaaaacatggcttgtggc
cctggccatggaatcagcattgggagtttaggcaaggattttcaagaagcaggggtgcaa
aatgtgacagtaaaatcagttacatttaagaacacacaaaatggtgtgaggatcaaaaca
tggggcagaccaagtactggctttgtaaaaaatgttattttccaacatgctacaatgatt
aacgttcaaaatccaattgttattgatcagaattactgtccatataacaaaaattgtcct
ggccaggtgtcaggtgtgacaattagtgatgttacatatcaagatatacatggaagttca
gcaacacgagtcgcgatgaaatttgattgcagtaaaagaaatccatgccgaggaataaaa
ttggaagatgtagatctcacttatcagaatcaaccagctgctcaagcttcttgtgctaat
gctgccggaacaacttctggtgtaattcaaccaacaagttgtttataa
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