Nicotiana sylvestris (wood tobacco): 104232666
Help
Entry
104232666 CDS
T05026
Name
(RefSeq) crossover junction endonuclease EME1B-like isoform X1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03440
Homologous recombination
nsy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104232666
03460 Fanconi anemia pathway
104232666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104232666
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104232666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
Motif
Other DBs
NCBI-GeneID:
104232666
NCBI-ProteinID:
XP_070011677
LinkDB
All DBs
Position
8:complement(218662638..218695721)
Genome browser
AA seq
634 aa
AA seq
DB search
MSQPIAVDILSDDDDDDAVNSADYFSVNQNDTVDLSTPLAIPSKKKQKIEESNTKLKPPV
LIIDDDDDPTRFEPSKSTPSFVADTPLSDFSKPDVSFVKCSFGSSSILNPKSFGLDLTPS
MVAETPASELLKYSVPIVRCTKAITVSQNRSSSNLDHQNDGGIDGLICLESDNESEDSGK
LVSWNEEEKVCSTKAIVKETELSSRPFKSTNGNDNFMRTAVDVSHRYLIEAGPSLDHGHP
DDESDILELNDDISRPRGKGNGKGKKSNTSSVDGVTGKTRMSKEERLRLNEEKKQQKERE
KLQKAAQKAEAAEIKKREKEKEKWEKGKFAHKSIVAHIDTKVVELGSIGGHLLSRLAEKG
LSFRVSSNPIEKSIVWSISVPEEISKISSEVIKVPYILIICEAEEFCDLVNSESLMSHIS
RVQRLYPLHTVCYLTNKLMAYINKREQGQYKDPANHIGWKRPPIEEVLSKLTINFVKVHS
RHCVDEAELAEHVAGLTYSLASCQFRNKLTRLSVNANGSLIPKSCVDKDMIKKSPWLKAL
VAIPKVQPRFAIAIWKKYPTMKSLLHVYMDPSKSVHEKEFLLKDLKVENMLGDDRKLGEI
CSRRVYRILMAQCGSIKTDDIESGADFFSQHSAE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgatcgccgtggacattctgtccgacgacgacgacgacgacgctgtcaac
agcgccgattatttctccgtcaaccaaaacgacaccgttgatctatcgacgccactggca
attccgtccaagaagaagcaaaaaattgaggagtcgaatactaaattgaagcccccagtc
ctcatcatcgacgatgacgatgatccgacacgatttgaaccctcaaagtccactccttca
tttgtcgctgataccccattatctgatttttccaaacccgatgtctcatttgttaaatgc
tcatttggttcctcttcaattttgaaccctaagtctttcggtcttgatttgaccccatcc
atggttgctgaaacaccggcgtcggagcttttaaaatatagtgtcccaatagtcagatgt
actaaagctattactgtttcacagaatcgctcttcgtcaaatttagaccaccaaaacgat
ggcggtattgatggactaatttgtttggagtctgataatgaatctgaggatagtggcaag
cttgtttcctggaatgaggaggagaaagtttgttccactaaggcaattgtaaaggagaca
gaattgagctccagaccttttaagtccacaaatggtaatgacaattttatgcgaacggca
gttgatgtttctcatcgatatttgattgaagctggtccttctctggaccatggtcatcct
gacgacgaaagtgatattttggagttaaacgatgacatctcaagaccgagaggtaaaggc
aacggcaaaggcaagaaaagtaacacaagcagtgtagatggagtgacagggaaaacgagg
atgtcaaaggaggaacgtcttcgcctaaatgaagaaaagaagcagcagaaagagcgagag
aaattgcaaaaggcggcccagaaggctgaagctgcagagataaaaaagcgagaaaaggaa
aaggaaaagtgggaaaagggaaagtttgcccataagtctattgtagctcacattgacacc
aaagttgtggaactaggctcgatcggaggtcatttgctatcaaggcttgcggaaaaaggt
ctttccttccgagtttcatcaaatccaattgaaaagtctattgtgtggtcaataagtgtt
ccggaggaaatatcaaagatttcatcagaagttatcaaagttccatatatattaatcata
tgtgaggccgaggagttttgcgacctcgtgaatagcgaatcattgatgagtcatatttcc
cgtgttcagcgcctttatcctcttcatacagtctgttacctcacaaacaagcttatggca
tacatcaacaaaagggaacaaggtcaatacaaggaccctgccaatcatattggttggaaa
cggccacctatagaggaggttctgtccaagttaacaattaatttcgttaaggtgcattca
agacattgtgttgacgaagctgaattagctgaacatgtagctgggctgacttacagctta
gcttcttgtcagtttagaaacaagttaacaagactttctgttaatgcaaatggttctctt
attcccaagagttgcgttgacaaggacatgataaaaaagagcccctggttgaaagcattg
gtggctattccaaaggttcaacctcgatttgccattgccatatggaagaaatatcccaca
atgaaatctcttttgcatgtttacatggatccaagtaaatcggtacatgagaaagaattt
ctgctgaaagatttgaaagtcgaaaacatgttgggtgatgatagaaaattgggagagatc
tgttctaggagagtatacagaatattgatggctcaatgtggaagcatcaagacagatgac
attgagagtggagctgatttcttcagccagcactctgctgaataa
DBGET
integrated database retrieval system
