Nicotiana sylvestris (wood tobacco): 104232823
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Entry
104232823 CDS
T05026
Symbol
RPB2
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03020
RNA polymerase
nsy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104232823 (RPB2)
09124 Replication and repair
03420 Nucleotide excision repair
104232823 (RPB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104232823 (RPB2)
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104232823 (RPB2)
Enzymes [BR:
nsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104232823 (RPB2)
Transcription machinery [BR:
nsy03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104232823 (RPB2)
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104232823 (RPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
104232823
NCBI-ProteinID:
NP_001289519
UniProt:
Q1L5Z4
LinkDB
All DBs
Position
6:complement(26190023..26197288)
Genome browser
AA seq
1203 aa
AA seq
DB search
MYEESEYVDENVDDRVLMAVDEEEEQAEGDEAQEITQDDAWAVISAYFEEKGLVRQQLDS
FDEFIQNTMQEIVDETANIEIRPESQHNPSRQPDFVETIYKIKFTQIYLSRPMMTESDGE
TNTLFPKAARLRNLTYSSPLYVDVKKEVIKKGHDYEEVTENQEFTKVFIGKVPIMLRSSY
CSLYNLSEKDLTELGECPYDQGGYFIVNGSEKVLIAQEKMSSNHVYVFKKRQPNKYAYVA
EVRSIAEGQNKAPSSMFVRMLSRSNAKGASGQYIRATLPYIRAEIPIIVVFRALGFVADK
DILAHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGFTRERRIKYAKEI
LQREMLPHVGTREYCETKKAYYFGYIIHRLLLCVLGRRPEDDRDHYGBKRLDLAGPLLGG
LFRMLFRKLTRDVRSYVQKCVDSGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTR
AGVSQVLNRLTFASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLV
KNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPDLL
VRTLRQLRRQVDVNTEVGVVRNINLKELRLYTDYGRCSRPLFIVEKKKLIIKKKDIIALQ
MRESSEDSGWHDLVAKGFIEYVDTEEEETTMIAMTINDLTNSRLNPEEAYSETYTHCEIH
PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLV
TTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK
KMGTLVKEDFGRPDRENTMGMRHGSYDKLDDDGFAPPGTRVSGDDVIIGKTTPISQDDAQ
GQPARYTQKDHSTSLRHSETGIVDQVLLTTNADGLRFVKIRMRSVRIPQIGDKFSSRHGQ
KGTIGMTYTQEDMPWNIEGITPDIIVNPHAIPSRMTIGQLVECIMGKVAAHMGKEGDATP
FTDVTVDNISKALHRCGYQMRGFERMYNGHTGRVLTAMIFLGPTYYQRLKHMVDDKIHSR
GRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCQQC
GLIAIANLKKMSFECRSCRNKTDNVQVYIPYACKLLIQELMSMAIAPRMLTKEPKPSSGK
KAS
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaagaaagtgaatatgtagatgaaaatgttgacgatagagtactaatggcagtt
gatgaagaagaagaacaagctgagggcgatgaggcgcaggaaataactcaggacgatgca
tgggcagttattagtgcatattttgaagagaaaggtctcgtaaggcaacaattggactcg
ttcgacgagtttatacagaatacaatgcaagaaattgttgatgaaactgctaatattgag
atccgtcctgaatctcagcataatcctagtcgtcaacctgatttcgttgagacaatctat
aagatcaagtttactcagatatacttgagtagacctatgatgacagaatctgatggagag
actaatactttgtttccaaaggctgcaaggttaaggaacttaacatactcctcccctcta
tatgttgatgtgaagaaggaagtaataaagaaaggtcatgactatgaagaagtcactgag
aatcaggaatttaccaaagttttcattggaaaggttccaataatgcttcgatcgagctac
tgcagcttgtataacctatcagagaaagacttaactgagttgggagagtgtccttatgat
caaggtggatatttcatagtcaatgggagtgaaaaagttctgattgcacaggaaaaaatg
agcagtaatcatgtttatgtattcaagaaaagacagccaaacaagtatgcatatgtagca
gaagttcggtctatagctgagggccaaaacaaggcgcctagcagcatgtttgttaggatg
ctttctaggtccaatgctaagggggcctctgggcaatatatacgtgccactcttccatac
atacgggctgaaattccaattatagttgtcttcagggcattaggatttgtcgcagacaag
gatatattggcacatatctgttatgattttgctgacacacaaatgatggaattactccgc
ccttccttggaagaggcttttgtgattcaaaaccagcaggttgcacttgactatattggc
aaaagaggatctactgttggtttcacaagagaaaggagaattaagtatgcraaagagatc
ctccaaagggagatgcttccacatgttggtactagggagtattgtgaaactaagaaggcc
tactatttcggctacatcatccatcggcttttactctgtgtactaggacggaggcctgaa
gatgatagggatcattatggarataaaagactggatcttgctggccctttacttggtggc
ttattccgaatgctattcagaaagctaaccagggatgtgagatcctatgttcaaaagtgt
gttgacagtggaaaggatgtgaatttgcaatttgcgattaaagcaaaaacaattacaagt
ggacttaagtattctcttgctactgggaactggggacaagcaaatgcagctggtacaagg
gcaggagtttcacaggttttgaatcgtttgacatttgcatctactctttctcacttgcgt
agattgaactcaccaatagggcgcgagggtaaactggcaaaacctaggcaactccacaat
tctcactggggaatgatgtgtccagcagaaacgcctgaaggacaagcatgtgggctggta
aagaaccttgcactaatggtgtacataacagtaggatcagcagcaaatccaattttggag
tttctagaggagtggagtactgaaaattttgaggaaatatctcccgcggttattccccaa
tctaccaagatttttgtaaatggttgttgggttggcattcatcgtaatccagatctattg
gttaggacactgagacagctgaggagacaggttgacgttaatactgaagttggagttgtg
cgcaatataaatttaaaggaactgcggctatatacagattatggacgctgtagtaggccg
ttattcattgtggagaaaaagaagttaataataaagaagaaggatattatcgcattgcag
atgagggagtcatctgaagattctggctggcatgatcttgtggcaaaaggatttattgag
tatgttgatacagaggaagaagagactacaatgattgcaatgaccataaatgatcttaca
aattcaaggctgaacccagaagaggcttattctgaaacctacacgcactgtgaaatccat
ccatctttgatattgggagtatgcgcttctatcataccatttcctgaccataaccagtcc
cctcgtaacacataccaatcagctatgggaaaacaagcaatggggatttatgtcaccaat
taccaatttcggatggatacattggcctatgtactgtattatccgcagaagcctcttgtt
actacacgtgctatggagcatttgcatttcaggcagcttcctgctggcattaatgccatt
gttgccatttcctgctattctggctataaccaagaagactctgtcatcatgaatcaatct
tcaattgaccgtggcttcttccgctctctattttttcgttcatatagagatgaagagaaa
aagatgggaacgcttgttaaagaggatttcgggcgtcctgatagagaaaataccatggga
atgcgacatggatcctatgataaattagatgatgatggatttgcgcctcctggaacaaga
gtttctggtgatgatgttataattggaaagaccacaccaatttctcaagatgatgctcag
ggacaaccagcaagatacacacaaaaagaccacagtacaagtctacggcatagtgaaact
ggaattgtggatcaggttcttttgacaacaaatgcagatggactgagatttgtcaaaata
agaatgaggtctgtcagaattccacaaattggagataaattcagcagcaggcatggacaa
aaaggaacaataggaatgacttatacacaagaagacatgccatggaacattgaaggcatc
accccagatatcatcgtgaatccacatgccattccttctcgtatgacaattggtcagcta
gtcgagtgtattatggggaaggttgctgctcacatgggaaaggaaggagatgctacccct
tttactgatgttactgtggataatatcagcaaagctctgcacaggtgtggttatcagatg
cgtggttttgagagaatgtataatggtcatacaggccgtgtattgaccgcaatgatattc
ttggggccaacttattaccagaggctgaagcacatggtggatgataagatccattctcgt
ggtcgtggtcctgtgcagattctcactagacagcctgctgaaggaagatctcgggatgga
ggcctacgatttggggagatggagcgtgactgtatgatcgctcatggggctgcacatttc
ctcaaagagaggctgtttgatcaaagcgatgcttacagagttcatgtatgccagcaatgt
ggtttaattgcaattgctaatctaaaaaagatgtcatttgagtgcagatcttgcaggaat
aaaactgataatgttcaggtgtatatcccttatgcctgcaagcttctgattcaagagctc
atgtcaatggcaatcgcaccaagaatgcttacaaaggaaccgaaaccatccagcggaaag
aaagcatcctga
DBGET
integrated database retrieval system
