Nicotiana sylvestris (wood tobacco): 104232860
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Entry
104232860 CDS
T05026
Name
(RefSeq) SEC12-like protein 2
KO
K14003
prolactin regulatory element-binding protein
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104232860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsy04131
]
104232860
Membrane trafficking [BR:
nsy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104232860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
PEP5_VPS11_N
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
BBS2_Mid
DUF7165
WD40_like
CFAP43_N
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
104232860
NCBI-ProteinID:
XP_070006989
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Position
7:complement(18794717..18808016)
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AA seq
389 aa
AA seq
DB search
MDNSANCKNYGVPIYGAGWVPSSALRSAVEPPADDEKDDGDKSSAPAPENYVVLAGGGGE
GNSGIRNALVVAQFDFDSNVLSDEPVAREGTGGDLPYRMAIHPGGDGLICSMPKSCRWFD
WDIQRADNLSLGLRSSERVLEPLQDVGQQLALTFNNEGSLLAVGSEDGKLRVFKWPRMEI
SLDEANAHASVKDLDFSPDGNFLVSVGSGPCRIWDVSKSTSVASLMKENDEIFGYCRFSP
VNDENQVLYITTMRDQGGSISKWSTTTWKRIRSKRVVRDPVCAFNISPNGKLLAIGTIEG
DVLIVSSNNLQVQNVVKKAHLGLVTTLKFSEDSRALLSASMDSRVRVTIIKEEKKSGLSL
WIVILVLLIAIAVFYAANNGILPLELNST
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggacaattctgcgaattgcaagaactacggcgtccctatctacggtgccggttgggtt
ccgtcgagcgccctcagatctgccgtcgaaccgccggccgatgatgaaaaggacgatggc
gacaaatcctcagctccggcgccggaaaactatgtagtccttgccggaggaggtggagaa
gggaatagcggtattcgcaacgcgctcgttgtagctcagtttgattttgattccaatgtt
ctctctgatgaacctgtggcaagagaaggaactggtggtgatctgccctataggatggcc
atccatcctggtggagatggtctgatatgttcaatgccaaaaagctgcagatggtttgac
tgggatattcagagagctgataatctttcacttggtctaagatcatctgagagagtactt
gagccattgcaagatgttggacaacaattagcgctaacttttaataatgaaggttcttta
cttgctgtcggcagtgaggatggcaagttgagggttttcaagtggcccagaatggaaatt
agtcttgatgaggctaatgctcatgcttctgtgaaggatctagacttcagccctgatgga
aactttcttgtttctgttggaagcggcccttgccgtatttgggacgtctctaaatcaaca
tctgtagcttctttgatgaaagaaaatgatgagatctttggctattgtagattctcacca
gttaatgatgagaatcaggttctatacatcaccacaatgcgagatcaaggtggaagtatt
tcgaagtggagtactactacgtggaagaggataagatcaaagcgtgttgttcgtgatcct
gtttgtgcctttaatatttcacccaatgggaagcttctggcaataggaacaatcgaggga
gatgtactgatagtttcttctaacaacttgcaagtgcaaaatgtggtgaaaaaggctcat
cttggtcttgtgacaacattgaagttctcggaagattcgagggctttgctttctgcctcc
atggattcaagagtgagagtgacaattataaaggaagagaagaaaagtggtctgagcttg
tggatcgttatactcgtccttctgattgcaatagctgtattttacgcagcaaacaacggg
attcttccgttggagttaaactctacttaa
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