Nicotiana sylvestris (wood tobacco): 104232906
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Entry
104232906 CDS
T05026
Name
(RefSeq) transcription initiation factor TFIID subunit 15b-like
KO
K13098
RNA-binding protein FUS
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03015
mRNA surveillance pathway
nsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104232906
09122 Translation
03015 mRNA surveillance pathway
104232906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsy03041
]
104232906
Spliceosome [BR:
nsy03041
]
Complex A
Other components
Complex A specific factors
104232906
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
104232906
NCBI-ProteinID:
XP_009784492
UniProt:
A0A1U7WX51
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Position
2:complement(208045175..208053942)
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AA seq
532 aa
AA seq
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MAGNYGYDGGVSDPPPTDGGYGGSGGDGYSGSGGNGYDGSGTGGYGGSGGTGGYGGSGGS
GGYDSSSGGGYGGSGVGGHGDFEGSGYGGPGGGGYASGNRGGYGGSGNGGGYGGSSSRGG
YGGSGGGKYGAGGGSYGGSTGGYGNSDRGSGRGSGGYGGGGSHNQGGGGYQGGDRGGSGG
RGGGRSGGSGRDGDWRCPNPSCGNLNFARRVECNKCGAPSPGGNDDRGSRGGSGYGRGGS
GGGYGNNRGGRGDNYDRGSGGSNRNGPYAGNQGRADGGYGQGPPAARPSYGGPDSSYPPP
SNTYGGNSDYAPDAVPPPASYSGAPPSYPPSHASAVGYGQNIQSDARGDGRGGPQGGYDG
GYGGGPRKEVGSHVSAEAPAKVKQCDEHCGDSCDNSRIYISNLPPDVTIEELQELFGSIG
QVARIKQKRGYKDQWPWSIKIYTDEKGNNKGDAVLSYEDPSAAHSAGGFFNNYDVRGYKI
SVAMAEKSAPKDPSAYGSGGRGRGGYGGDRRRDNYGSGPDRNFRGGNRSRPY
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaattacgggtacgacggcggcgtatctgacccgccgcctactgacggagga
tacggcggctctggcggtgatggatacagtggatcgggcggaaatggatacgacggctca
ggcactggtggatacggtggctcgggaggcactggtggatacggtggttcaggaggcagt
ggtggatatgatagttccagcggcggaggatatggtggctccggtgtcggtggacatggt
gattttgaaggcagtggatacggtggtcctggaggaggtggatatgcatcgggcaacaga
gggggatatggtggatcgggcaacggagggggatatggtggatcgagcagcagaggggga
tatggtggatcaggtggtggaaaatatggtgcgggagggggtagttacggaggcagcact
ggaggatatggtaacagtgatagaggcagtggaagaggaagtggaggatatggtggcggt
ggttcccataatcaaggtggtggtggatatcaaggaggagatcgtggtggtagcggtgga
agaggtggtggtcgcagtggaggaagtgggagggatggtgattggcgttgccctaatcca
agttgtgggaacttgaactttgctagaagagttgagtgcaataaatgtggtgcaccttcg
ccggggggtaatgatgatcgtggtagcagaggtggtagcggttatggtagaggtggaagt
ggtgggggatatggaaataatcgagggggaaggggtgataattatgatagagggagtgga
ggaagcaataggaatggcccgtatgctggtaatcagggaagagctgatggtggttatggt
cagggtcctccagctgctcgtccatcttatggaggccctgatagcagctatccaccaccg
tccaatacttacggtggcaactcagactatgcccctgatgcagttcctccgccagcaagt
tacagtggtgcacctccatcatatcccccttcacatgctagtgctgttggctatggtcag
aatatacaatctgacgcacgtggtgatggtcggggtggcccacaaggaggatatgatggg
ggatatggtggtggtcctcgaaaagaagtaggtagtcatgtcagtgctgaggctccagcg
aaggtcaagcagtgtgatgagcattgtggagattcttgtgacaactcaagaatatacatc
tcaaatttgccccctgatgtcaccattgaagaactccaagagctttttggaagcattgga
caagtggcaagaatcaagcaaaaacgaggttacaaagaccagtggccttggagcataaag
atatatacagatgaaaaaggaaataacaaaggagatgcagtattgtcatatgaagatcct
tctgcagcgcactcagctggaggcttttttaataattatgacgtcagaggttataagatc
agtgttgcaatggctgagaagtctgcaccaaaggatccttcagcgtatggttctgggggc
cgtggtcgaggcggatatggtggtgaccggcgcagagataactatggttctggtccagac
agaaactttcgtggtggaaaccgttcacgtccctactga
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