Nicotiana sylvestris (wood tobacco): 104232929
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Entry
104232929 CDS
T05026
Name
(RefSeq) cell differentiation protein rcd1-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104232929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104232929
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104232929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
104232929
NCBI-ProteinID:
XP_009784510
UniProt:
A0A1U7XDI1
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Position
5:complement(45913974..45924301)
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AA seq
308 aa
AA seq
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MDNLPKPPPLVDQLRRSALLVAQKPPDLPTASPEQLIALLRDSNLREAVLSRLNIVIKQK
REMCSDLALLLWNSFNTVYILLQEVLAVYPKLSTSTLTMKESTRVCDALTLLQCMASHPE
TRKGLVKANIPFYLYPFLRASANEKPLEFVRLSSLGLIGSLAKFDDPYGPEILNFFLETQ
LFPLCLRCMDQGDELSRKVATLIVMKILMQEEGLDYCCAFTERFLAVVQTLSRLVEKISV
NPCLQLLKYVVQCYLSLSQVSRVCDVLRYNFPPQLIDNTFHIVLREDPYTLNMLQQVFFN
ITSRGSRP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggataatttgccaaagccgccgccattggtggaccaactccgccgtagcgcgttgtta
gtcgcacagaagcctcctgacttgccaacggcctcgccggagcagttgatagcgttgctt
cgcgacagtaatcttcgtgaagcggttcttagtcgactcaacattgtgatcaaacagaaa
cgagaaatgtgcagcgatctggctttgctgctgtggaactcctttaataccgtgtacata
cttttacaggaagtattagcagtgtacccgaagttgtcaacctcaacattaaccatgaag
gaatcaactcgagtttgtgatgctcttactttacttcagtgtatggcctctcacccagaa
acaaggaaggggctcgtcaaagccaacataccattttatctttacccatttctcagagct
tcagcaaatgagaagcctctggaatttgtgaggcttagcagcttgggtcttattggttcc
ctagcaaagtttgatgatccatatggaccagaaattcttaatttttttctagaaacacaa
ctatttcctttgtgcctgcgctgcatggatcagggagatgaactgtcacggaaggttgca
acgctcatagttatgaaaatcttgatgcaagaggaagggctggactattgttgtgctttt
actgaacgttttctggcagtggtacaaaccttgagtcgacttgtagaaaagatctctgtt
aacccttgtttacagctgctaaagtatgttgttcaatgttatctaagtctttcgcaagta
tcaagggtatgtgatgtattgagatacaattttcctccgcagctaattgacaacactttt
cacattgttcttcgtgaagatccatatactctaaatatgctacagcaagtatttttcaac
ataacttcgcggggatctagaccgtaa
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