Nicotiana sylvestris (wood tobacco): 104233027
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Entry
104233027 CDS
T05026
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104233027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104233027
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104233027
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
F-box
DUF4239
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
104233027
NCBI-ProteinID:
XP_009784636
UniProt:
A0A1U7X4L9
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Position
6:complement(181758503..181763018)
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AA seq
585 aa
AA seq
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MASSSFPEQVLKHLFSFLTSDKDRNSISLVCKSWYEIERRCRRKVFIGNCYAVSPEIMIR
RFPTEVRSVKLKGKPHFADFNLVPEGWGAHVQPWIAAMSGTYTMLEEIRLKRMVVSDESL
ELISTSFEHFKVLVLLSCEGFTTDGLAAIAANCRKLRELDLGESEVEDLSSDWLSYFSDS
CTSLVSLNISCLGSEVSFSDLERLIARSPNLRTLRLNHSVPLEKLPNLLLGASQLVEFGT
GAFSSEVQSDIFSNLEEAFSGCKRLKGLSGFWDVVPAYLPAIYPVCSGLTSLNLSYATIQ
NPDLSKLISQCHNLQRLWVLDYIEDTGLQMLAASCKDLQELRVFPSDPFAPEPDVLLTEQ
GLVAVSDGCPKLQSVLYFCRQMTNAALVTIARNRTNMTRFRLCIIEPRTPDYLTLEPLDV
GFGAIVEECKELRRLSLSGLLTDRVFECIGTHAKKLEMLSIAFAGDSDLGLHQVLSGCES
LRKLEIRDCPFGDEALLANAAKLEKMRSLWMSSCSVSFGACKLLGQKLPKLNVEVIDERG
PSDTRPDSCPVDKLYIYRTVAGPRLDRPDYVWTMNDDAALRSTEP
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcatcatttccagaacaagtgttaaagcacctgttctcgttcttaacctcc
gacaaggaccggaacagtatatccttagtgtgcaaatcatggtatgagattgagaggcgg
tgcaggaggaaagtattcataggaaactgctacgccgttagccctgagattatgatcaga
cggttccctactgaagttagatccgtgaagctgaaaggaaagccacattttgcggacttt
aacctagtacctgaaggttggggcgcgcatgtacaaccttggattgctgcaatgtcgggg
acttatactatgcttgaggagattagactgaagcgaatggttgtcagtgatgagtctttg
gagttgatttctacttcgtttgagcattttaaggtattggtgttgttatcttgtgaaggg
tttactactgatggacttgctgctattgctgctaactgcaggaaactgagagaactggac
ttgggagaaagtgaagtggaggacctaagtagcgattggctcagttatttttctgatagc
tgtacttcactggtttcacttaacatttcttgtttgggttctgaggtcagcttctcagat
ctggagcgtctgattgctcgctctcctaatttgaggactcttcggctcaatcattctgtt
ccccttgagaagcttcctaacctacttcttggcgcttcccagttggttgaatttggtaca
ggtgccttctcttctgaggtacagtctgatattttctcaaacctggaagaagctttttca
ggctgcaagagacttaaaggcttgtctggattttgggatgtcgtgccagcttaccttcca
gctatatatccagtttgctccggactcacctctttgaatttaagctatgctactattcaa
aaccctgatcttagcaagctcataagtcagtgtcacaatttgcagagattgtgggtacta
gactacattgaagatactggtctccagatgcttgccgcttcctgtaaggaccttcaagaa
cttagggtgtttccttctgatccctttgctccagaaccagatgttttacttacagagcaa
ggccttgtggctgtctcagatggctgccctaagctccagtcggttttatacttctgccgc
caaatgacaaatgccgctttggttactattgcaagaaaccgtactaacatgactcgtttc
cgcttgtgtattattgaacctcgaactcctgattacttgactcttgaaccgcttgatgtt
ggttttggggcaattgtggaagaatgcaaagagttgcggcgactttctctttctgggctc
cttactgaccgtgtgtttgagtgcattggaacccatgctaaaaagttagagatgctttcc
attgcttttgctggggatagtgatctgggcctccaccaagttctatctggttgcgagagc
ctcagaaaactagagatcagagactgcccatttggcgatgaggctcttttggctaatgct
gcaaagctggagaagatgcgttccctttggatgtcttcttgttcagtaagttttggagcc
tgtaagctgctaggccagaagctgcctaagcttaatgttgaagttatagatgagaggggt
ccctcagatacgcggccagatagctgccctgttgataaactttacatataccgaacagtg
gctggaccaaggcttgacaggcctgattatgtttggacaatgaatgatgatgctgcactg
aggagtactgagccataa
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