Nicotiana sylvestris (wood tobacco): 104233145
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Entry
104233145 CDS
T05026
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00900
Terpenoid backbone biosynthesis
nsy01100
Metabolic pathways
nsy01110
Biosynthesis of secondary metabolites
Module
nsy_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
104233145
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nsy01006
]
104233145
Enzymes [BR:
nsy01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
104233145
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
104233145
2.5.1.29 geranylgeranyl diphosphate synthase
104233145
Prenyltransferases [BR:
nsy01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
104233145
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
pATOM36
Motif
Other DBs
NCBI-GeneID:
104233145
NCBI-ProteinID:
XP_009784771
UniProt:
A0A1U7X504
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All DBs
Position
2:89490253..89491883
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AA seq
363 aa
AA seq
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MSLSTAITTWGNTYFALGNNGRSRFYSHGFLPTHLKIKFSTNNPSPLSVSALLTTKQQTD
ESKNKKKQAMEFNDYVLEKANSVNRALESSVLIKEPVKIHESMRYSLLAGGKRIRPMLCI
ASCELVGGDESIAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLA
GDALLALAFEHIATRTKGVPSHRIVRVVGELAKCIGAEGLVAGQVVDIISEGVSDVDLKH
LEFIHLHKTAALLEGSVVLGAILGGADDEEVEKLRKFARCIGLLFQVVDDILDVTKSSQQ
LGKTAGKDLVADKVTYPKLIGIDKSREFAEELNKEAQAQLAGFDQEKAAPLIALANYIAY
REN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttctacagcaattacaacatggggcaacacctattttgcccttggaaataac
ggcagatccagattttactctcatggattcttacctactcatctgaagatcaaattctcc
accaacaacccttccccgctttctgtctcagctcttcttacaacaaaacaacaaactgat
gaaagcaagaacaagaaaaaacaagcaatggagttcaatgattacgttcttgaaaaagct
aattctgtgaacagggctttggaatcttcagtcttgattaaggaaccagtcaagattcat
gaatccatgagatattctcttcttgctggtgggaaaagaatccgacccatgttgtgtata
gcctcttgtgaacttgttggtggagatgaatccatagctatgcctgcagcttgtgctgtt
gagatgattcataccatgtctttaattcatgacgatcttccttgtatggataatgatgat
cttagaagagggaagcctacaaatcacaagatttatggtgaggatgtagctgttttagca
ggggatgcacttcttgcattggcttttgagcacattgctactcgaacaaaaggggttcct
tcacataggattgtgagggtggttggtgagttagctaagtgtattggtgcagagggactt
gtagctggacaagttgtagatataatttcagagggggtttctgatgttgatttgaagcat
ttagagttcattcatttgcacaagactgcagctttattagaagggtcagtggtgttaggg
gctatattaggaggggcagatgatgaagaagtggaaaaattaaggaagtttgcaagatgt
attgggttgttatttcaggttgtggatgatattcttgatgttacaaagtcttctcaacaa
ttggggaaaaccgcaggaaaggacttagttgctgataaggtaacttatcccaaactgatt
ggtattgacaagtcaagggagttcgctgaggagttaaacaaagaggctcaagctcagctt
gctggatttgatcaagagaaagcagctcctttgattgctttagcaaattatattgcttat
agagagaattaa
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