KEGG   Nicotiana sylvestris (wood tobacco): 104233296
Entry
104233296         CDS       T05026                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03020  RNA polymerase
nsy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104233296
  09124 Replication and repair
   03420 Nucleotide excision repair
    104233296
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nsy03021]
    104233296
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104233296
Transcription machinery [BR:nsy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     104233296
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      104233296
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 104233296
NCBI-ProteinID: XP_009784988
UniProt: A0A1U7X2D3
LinkDB
Position
6:135073478..135078091
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPTNQISQVFEKSLQ
YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIKNRGRALD
EEAIEKMLTDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtcaggagaagaagaagaaaatgctgctgagctcaaaatcggtgatgaatttttgaag
gcgaaatgtctaatgaattgtgaagtcgcgttgattcttgaacacaagtacgagcagctt
caacagatgtctgaagatccaacgaatcagatttcacaggtatttgaaaagtcactgcaa
tatgtgaagcgtttcagtcggtacaagaaccctgatgctgttagacaagctcgagaaatc
cttagtaggtatccacttgctgaattcgagctctgtgttctggggaatctttgccccgag
actgttgaggaaggtatcgccatggtcccatccatcaagaataggggacgcgcacttgat
gaggaagcaatcgagaaaatgctaactgacctctctctaattaagaaattcgagtag

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