Nicotiana sylvestris (wood tobacco): 104233436
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Entry
104233436 CDS
T05026
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104233436
Transcription machinery [BR:
nsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
104233436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
104233436
NCBI-ProteinID:
XP_009785134
UniProt:
A0A1U7XDV1
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Position
3:142903642..142909878
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AA seq
519 aa
AA seq
DB search
MGVVTVSSSASRSPLGLSTRFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETS
KENEKRSRRVSKRTERVHAVSIDIEASTSPLELDYSEAAAKLESIYKRSLETDSSDTEAK
DHQIVKRRQRTRKRIVEGDEETKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVAS
SQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI
LQVKENLQNDLGREPTDAEAAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINKY
FQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKV
PFGLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLSPERYHEVMKVSKPVFSLHARHM
TTQEELINGITDVDGVDGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL
GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYIF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagctctgcttctcggagtccattgggattaagcacaagg
ttttctgctcatttatgtccgcttaaaaggcctgtagttgtatcatttaaaaaagataaa
acgaaaaaaacaactttagttgcacctaaggaatccatatcgttgcctatagaaacgtct
aaagagaatgaaaagaggtcaagacgagtatctaaacgtactgagagagtgcatgctgtt
tcaattgatattgaagcatctacaagtccgttagagttggactacagtgaagctgctgcc
aaacttgaaagtatctacaagcgcagtctggaaactgatagttccgatacagaagctaag
gatcatcaaatcgtgaagagaaggcaaaggacgaggaagagaattgtagaaggcgacgag
gaaacgaagaagggaattgctgataatgtggtcaagaatcgtcgaaagaagtcaaagcgg
ctgaatcttgaccagaggattgctctactaaagaataaagaaggtgaattggttgcttca
tcccaaaaaagagaacttaaagaggacaccgaagatgaaaaaattgataagcttgtcaga
gaatattcaggtgctactgacttagcgagcttagactggaagaaaatgaagatccctcca
gtgcttccatcttctgagcatgcgtggctcttcaagttgatgcaacctatgaaggcaatc
cttcaagttaaggagaacttgcaaaatgatttggggcgagaaccaactgacgctgaagca
gccgaggcaacaaatatcgatgcctctgaactacggaagaatctggaagttggtcgagct
gccagaaataagctgattaagcacaatctacgtcttgttttgttcgtgataaacaaatat
tttcaagattttgctaatgggccaaaattccaagacctctgtcaggcaggcgtcaaggga
ctaattacagctattgatcgatttgaacctaataggaaattcagactgtcaacgtatggt
cttttttggataaggcatgccataattcgttctatgacaacctcaagcttcaccaaagtc
ccatttgggcttgaatctatcagagtggaaattcagaaggccaaattgcagctgctattt
gagcttcagaggatgccaacagatgaagagataattgaaagagttagactatcccccgag
agataccatgaagtgatgaaagtatcaaaacctgtcttctctctccatgcaagacacatg
acgacccaagaagagcttattaatgggataactgatgtagatggcgtagatggggataag
aggaggcaaccagctctactcaggcttgctcttgatgatgtgcttgattctcttaagccc
aaggagagtctagtaatcaggcaaagatatggacttgatggcaaaggtgatagaacattg
ggagaaattgcgggtaacctaaatatttcgagagagatggtacggaagcatgaagtgaag
gctctcatgaagctcaagcatccaactcgagtagattatcttcgccggtacatattctaa
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