KEGG   Nicotiana sylvestris (wood tobacco): 104233447
Entry
104233447         CDS       T05026                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like isoform X1
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy04144  Endocytosis
nsy04517  IgSF CAM signaling
nsy05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    104233447
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104233447
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    104233447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nsy04131]
    104233447
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:nsy04812]
    104233447
Membrane trafficking [BR:nsy04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    104233447
Cytoskeleton proteins [BR:nsy04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     104233447
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR55 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin EIF3I Beta-prop_HPS5 Beta-prop_WDR3_2nd Tricorn_2nd Beta-prop_WDR75_1st WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML RMC1_N Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_NUP159_NUP214 eIF2A WD40_MABP1-WDR62_2nd PEP5_VPS11_N BNR_3
Other DBs
NCBI-GeneID: 104233447
NCBI-ProteinID: XP_009785144
UniProt: A0A1U7XDW1
LinkDB
Position
10:complement(137385723..137396756)
AA seq 374 aa
MAATSIHKFAQCITCHAWSPDLSMIALCPNNSEVHIYKLSEDKWEKVHVLQKHDQIVSGI
DWSSRSNKIVTVSHDRNSYVWNQEASGWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHDSSVTSIAWHPNNILLATTSTDGKCRVFSTFIKGVDA
KDSAMGNSADTKFGEQIVQLDLCFCWAFGVRWSPSGNTLSYVGHNSMIYFVDEVGPSAAA
QSVAIRDLPLRDVSFLSERMVVGVGFDCNPMVFVADESGLWSFLRFLDERKAASSSAKYG
SQFSEAFGKFYGQSKYSANNNVEQSRGAHDNCINCILPLAKQRKSSVTRFSTSGLDGKVV
IWDLQKQEDLLEYL
NT seq 1125 nt   +upstreamnt  +downstreamnt
atggcagcaacttcaatacataagtttgctcagtgcattacttgccatgcttggagtccc
gacctctccatgattgcgctttgtcctaacaatagtgaagtacatatatataaactatcc
gaggacaagtgggagaaggtccatgttcttcaaaagcatgaccaaattgtgtctggtata
gattggagttcaagatccaataaaatagttactgtttctcatgatcgtaattcatatgtt
tggaaccaagaagcgtcagggtgggtacctactctggtcattctcaggctaaatcgtgca
gcactttgtgtgcagtggagtccaaaagaaaacaagtttgctgttggaagtggggctaaa
actgtttgtatatgctactatgagcaagaaaataactggtgggtgagtaagctaatcagg
aaaaggcatgattcatcggtaacaagtattgcttggcatccgaataatattctcctagca
acaacatccactgatggtaaatgtagagtattttcaacattcattaaaggtgtcgatgca
aaggactctgcaatggggaattctgcagataccaaatttggagagcaaattgtccagctt
gatctctgcttttgctgggcttttggtgtcagatggtccccaagtggcaataccttatca
tatgtaggtcataactcaatgatatactttgttgatgaagttggtccctctgctgcagca
caaagtgtagcaatccgcgatttgcctcttcgtgatgtatcgtttctttctgaaaggatg
gttgttggtgtgggatttgattgcaacccgatggtatttgtggcagatgaaagtggactc
tggagtttcttgagattccttgatgagcggaaagcagcgtcgtcaagtgctaaatatgga
tcacagttttccgaagcttttgggaaattctatggtcaatcaaagtattcagccaacaac
aatgttgagcagtcaagaggcgctcatgacaactgtatcaattgcatattaccacttgca
aaacagagaaaatctagtgtcacccgtttcagcacttcaggacttgatggaaaggtagtg
atatgggatttgcagaagcaagaagatttattggaatatctatga

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