Nicotiana sylvestris (wood tobacco): 104233749
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Entry
104233749 CDS
T05026
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104233749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsy03041
]
104233749
Spliceosome [BR:
nsy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104233749
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
104233749
NCBI-ProteinID:
XP_009785491
UniProt:
A0A1U7X737
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Position
8:complement(202737771..202746796)
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AA seq
483 aa
AA seq
DB search
MATLADSFLADLDELSDNEADVLDEENFDADHMEEDGDLADIEALNYDDLDNVSKLQKSR
RYIDIMQKVEDALEKESDVTNRGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDKY
RLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLP
EDVLQKTVEACDRALALDSAKKKVLDFVESRMGYIAPNLSAVVGSAVAAKLMGTAGGLSS
LAKMPACNVQLLGAKKKTLAGFSTATSQFHVGYIEQTETFQSTPPSLRMRAVRLLAAKST
LAARVDSISGDPTGKTGRTLREEIQKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR
KMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAAKV
AKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQALANQLGSGTQSTYFSETGTFSKI
KRT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttcctggcagatctggacgagttgtccgacaatgaagct
gatgttcttgatgaggagaattttgatgctgatcatatggaggaagacggagacttggca
gacatagaagcactaaattatgacgatctagataatgtttccaagttgcaaaagtcacgt
cgctacattgacataatgcagaaagttgaagatgcacttgagaaggagtctgatgtcaca
aatagaggtattgttctcgaagatgatccagagtatcagttgatagtagactgtaatgcc
ttatcagttgacattgagaatgaaattgttataatccacaatttcatacgcgacaagtat
cgattgaaattccctgagttagagtcgcttgttcatcacccaattgattatgctcgggtt
gttaagaagattggcaacgaaatggatctgactcttgttgacttggaaggattgctaccc
tcggctatcatcatggttgtctctgttacggcatcaactaccagtggcaagccattgcca
gaagatgttttacagaagacagtggaagcatgtgatagagcccttgctcttgattcagca
aagaaaaaggttcttgattttgttgagagtcgaatgggatatattgctcccaatctttct
gctgtagttgggagtgcagttgctgcaaaacttatgggtactgctggtggtctctcgtca
ttggcaaaaatgcctgcttgtaatgtccagcttcttggtgccaaaaagaagactttagca
gggttctccacagcaacttcccaatttcatgtgggttatattgagcaaacagaaacattt
cagagtacacctccttccttgaggatgcgggccgttagactgctggcagcaaaatctaca
ttagcggcacgcgtggattcaatcagcggagacccgactggaaaaactggaagaactctt
agggaagagatccagaaaaagatagagaaatggcaagagccacctcctgcaaagcagcca
aagcctcttccagttcctgattctgagcctaagaaaaagagaggtggtcgtcggctgaga
aagatgaaggaaagatatgctatcacggacatgcggaagctagcaaacaggatgcagttt
ggagtacctgaagaaagctccttaggggatggactaggggagggctacggcatgcttggt
caggctggaagcggcaagttgcgtgtatcagttggtcaaagcaagcttgctgccaaagta
gcaaagaaattcaaggagaagagttatggaagcagtggtgccacatcagggttgacttca
agtttggccttcaccccagtgcaagggattgagctatcaaatcctcaggcgcttgcaaat
cagcttggcagcggaactcaaagcacctatttctctgagactggaacgttttcaaagatt
aagagaacatga
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