Nicotiana sylvestris (wood tobacco): 104233993
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Entry
104233993 CDS
T05026
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03020
RNA polymerase
nsy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104233993
09124 Replication and repair
03420 Nucleotide excision repair
104233993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104233993
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104233993
Transcription machinery [BR:
nsy03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104233993
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104233993
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
104233993
NCBI-ProteinID:
XP_009785778
UniProt:
A0A1U7X4I6
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Position
10:complement(158252797..158257181)
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AA seq
318 aa
AA seq
DB search
MEGVSYQRFPRIKIREVKDDYMKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFISHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV
TSKDLLSSDHTVVPVDYSDASSGFDNSTNKGIIIVKLRRGQELRLRAIARKGIAKDHAKW
SPAATVTFMYEPDIYINEDMMETLTLEEKRELVDSSPTKVFGIDPENKVIVVDAEAYTYD
DEVLKKCEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSDD
TVEADDQFGELGAHMRGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgtctcgtaccagagattcccaaggatcaaaatccgtgaagttaaagacgac
tacatgaaattcgagctgcgcgacaccgacgccagcatagccaacgcgcttcggcgcgtg
atgatagcagaagtcccaactatcgccattgacctcgttgaaatcgaggtcaattcctcg
gtcctcaacgacgagttcatatctcatcgtctgggtctcatcccgctcactagcgagcgc
gcaatgagcatgcgtttctcccgtgactgtgacgcgtgtgacggtgacggacagtgcgag
tattgttccgttgagttttacctccgtgtcaagtgccttagtgaccagacgctcgatgtt
actagcaaagatttgttgagttcggatcatactgttgttcctgtcgattattccgatgct
tcctccggttttgataattctaccaataagggaatcataattgtgaaactacgacgtggg
caggagttaaggttaagagcaatagcacggaaaggaattgctaaagatcatgcgaaatgg
tctcctgcagcaactgtgactttcatgtatgaaccagatatctacatcaatgaggacatg
atggagaccttgactctcgaggagaaaagagaattagtagacagtagtcccacaaaagtc
tttggcattgatcctgaaaacaaggttattgtagttgatgctgaggcatacacttatgat
gatgaggtgcttaagaaatgtgaagccatgggaaaacctggacttatagagatacatgcc
aaggaagatagttttattttcactgttgaaacgactggcgcagtgaaagcttcacaattg
gtactcaatgcaatagaagtgctgaagcagaaattggatgcagtacgcctttcagatgac
accgtggaagcagatgatcagtttggagagttgggtgcacatatgcgcggagggtaa
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