Nicotiana sylvestris (wood tobacco): 104234090
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Entry
104234090 CDS
T05026
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104234090
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nsy01001
]
104234090
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104234090
03036 Chromosome and associated proteins [BR:
nsy03036
]
104234090
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
104234090
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104234090
Protein kinases [BR:
nsy01001
]
Serine/threonine kinases: Other
TAF1 family
104234090
Transcription machinery [BR:
nsy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104234090
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
104234090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
ubiquitin
Rad60-SLD
zf-CCHC_6
Ubiquitin_5
HTH_3
Motif
Other DBs
NCBI-GeneID:
104234090
NCBI-ProteinID:
XP_009785891
UniProt:
A0A1U7X8B3
LinkDB
All DBs
Position
11:complement(985150..1014647)
Genome browser
AA seq
1861 aa
AA seq
DB search
MGYESGGTSRDGRDEDDEDEYEEAGGGNRLLGFMFGNVDYSGDLDVDYLDEDAKEHLAAL
ADKLGPSLTEIDLSAKSPQASADAAEQDYDEKAEDAVDYEDIDEQYEGPEVQTFTEEDLL
LPKRNYFSSEVSLATLENRGSVFDDENYDEDDNEEEKEQEVVENAAEVQPTPEKGEYNND
AEVIFHGKKLPEEVLSPDAPESSEDLQEEEPLTMEEPVDGQSSLPLPVLCVEDGIAILKF
SEIFALHRPRKKADKRERRCSVPKDKYKAMDTLDIVEEDEVTLLRGSYQDFPWLRRAHVH
QDSALTFLDNEPGTVQGIDDLKPKVEQKDSWCSAKPMIENLSMDLSPDWSSPICPEFYPL
DQQDWEDRIIWDNSPPVSDNTAESCEISGPDCEALTHKQPDVEAESQCFQSEKEMEPHEK
GHSSFFSCSVSVEPFGSKQPSGHLDISLSEGRYHPQLLRLESRLNADRQKSTDTVKDGAT
DESLSSDALRRFSKLTLQNRDIMEESWVDNIIWEPDQPFPKPKLIYDLQDEQMLFEVLDN
RDGQQLLHHAGAMITTGLIKPSNGDSAELYGLGGLSGRFNIANDKFYLNRKSTQQLKSHS
KKRTAHGLKVLHSIPALKLQTMKAKLSNKDIANFHRPRALWHPHDNEVVLKEQRKLSTHG
PMKIILKSLGGKGSKLHVAAEETISSLKSKASKKLDFKLSEPVKIIYCGKELEDDKSLSA
QNVPPNSVLHLVRTRINLLPRAQKLPGENKSMRPPGAFKKKSDLSVKDGHVFLMEYCEER
PLLLGNAGMGARLCTYYQKSSPNDQKGTLMRNENTGLGSVLILDPADKSPFLGDIKPGCS
QSSLETNMYRAPIFQQKVSSTDYLLVRSAKGKLSIRRIDRIDVVGQQEPHMEVISPGSKG
VQTYIMNRLLVYMYREFRAIEKRGSRPFIRADELSAQFPSLSEAFLRKRLKHCADLQRRS
NGQLQWVMRFNFRIPSEEELRRLVSPESVCAYESMQAGLYRLKRLGITRLTHPTGLSAAM
NQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGF
SYVRTTPKAPISNAISKKKAVVAKGSTVTGTDADLRRLSMEAAREVLLKFNVPEEQIAKL
TRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQN
LSAVDGEENESDSEVNSDLDSFAGDLENLLDAEECEDGEEGSHEPKHDNVDGVKGLKMRR
RSIQAQVEEEIEDEAAEAAELCRMLMDDEEADRKKKKKEKVMGEQIGVMPDLRYRFGTES
TDRGKKPQIFSKPSIKSDRSNALDFTGDQKELQAEVFSTKRTLSSKVKPKKKFDIVDTGL
FNKKVKILGDGIKPVKEKKSARDSFVCGACGQLGHMRTNKNCPKYGEDVDARAESTDLEK
TTGKAISSIDPLDHPQIFSKKVIQKSGTKNVMIEAHEDDNSSSKAKVLKVKCGSTDKLLD
KPTPATSFNSDMPVTSDAETGTVPPPIKFNKIKFSNKMRAEDISNEAHKPSILIRPPTET
ADSHRSKKIVIKQLKDSASVDESFLEGSSGMDFRKTKKINELSYLGQQDREHFYEEALER
KRMDDKRLWEEEERRRVAVRQREERAKMIYERQKALEEQEKLAAIESYQDAIRREREEEE
RLKEKKKKKKKPEIRDDYLDDFLPRRNDRRIPDRDRSVKRRQPLESGRHAKEHAPPAKRR
RAGEVGLSNILEEIVDTLKSNVEVSYLFLKPVTRKEAPDYHKYVKRPMDLSTIKEKARKL
EYKNRGQFRHDVAQITINAHIYNDGRNPGIPPLADQLLEICDYLLEENDSILAEAEAGIE
R
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atgggttacgaatctggtggcacatcccgtgatgggcgtgatgaagatgatgaggacgaa
tatgaggaagctggtggtggtaaccggcttttgggatttatgttcggaaatgttgactac
tctggtgatcttgatgttgattaccttgatgaggatgcgaaggagcatcttgctgcttta
gctgacaagcttggtccgtctctgacagaaatagatttgtcagcgaagtcaccacaagca
tctgcagatgctgctgaacaagattatgatgagaaggcagaagatgctgtagattatgag
gacattgatgagcagtatgaaggacctgaggtacaaacttttaccgaagaggacctatta
ttgccgaagaggaattatttttcatcagaagtatctttagctactttggagaatcgtggt
tctgttttcgatgatgaaaactatgatgaggatgataatgaagaggagaaggaacaggag
gtggtagagaacgctgctgaagttcaacctactcctgaaaaaggggagtacaacaatgat
gctgaagtgatttttcatgggaagaagcttccagaagaagttctatccccggatgctccc
gaatctagtgaagatcttcaagaggaagaacctcttactatggaagagccagttgatggt
caaagctctctgcctctacctgttctttgtgtagaagatgggatagcaattctaaagttc
tccgaaatttttgccctccatcgacctcggaagaaagcagataagagggagcgacgatgc
tctgttcccaaagacaaatacaaggccatggacacactggatattgttgaagaagatgaa
gttacattactgagagggtcctatcaagactttccttggttgaggagggcccatgtacat
caagatagtgctttaacgttcctggataatgaaccaggaacagttcaagggattgatgac
ttgaagccaaaagttgagcaaaaggattcttggtgtagtgctaaaccaatgatagaaaat
ctatcaatggatctttctcctgattggagctcacctatctgtccggagttctatcctctt
gatcagcaagactgggaggatagaattatttgggataattctcctccagtgagtgataat
actgctgaaagttgcgagatttctggacctgattgtgaagcattgactcataaacaaccg
gatgtggaggccgagtctcaatgttttcagtcagaaaaagaaatggaaccccatgagaaa
ggtcacagctcctttttttcttgcagtgtttctgtggagccttttggttcaaaacaacct
tcaggacacctggatatttcattatcagaaggaagatatcaccctcagcttttgagatta
gagtctcgcttgaatgcagataggcaaaagagcacagatactgtaaaagatggagccact
gatgaaagccttagcagcgatgccttaaggcgatttagcaagcttacattacaaaacaga
gatataatggaggaatcttgggtggacaacattatttgggaaccagatcaaccctttccg
aagccaaagctcatatatgatcttcaagacgaacaaatgcttttcgaagttttggataac
agggatgggcaacagcttctgcatcatgctggagcaatgatcacaaccggtttaataaag
cccagtaatggtgattctgccgagttatatggactcggtggtttatccgggcgttttaat
attgccaatgacaaattctatctgaacaggaagtcaactcagcaactaaaatcacattca
aagaaacgcactgctcatggtctcaaagttctgcactcaatcccagctcttaagctgcag
acaatgaaggctaagctaagcaataaagacatagcaaattttcatcggccaagagcttta
tggcatccccatgataatgaggtggtacttaaggaacagagaaagttgtctacacacggg
ccgatgaaaatcatattaaagagcttgggtggcaaaggaagtaaacttcatgtggcagca
gaggagaccatttcttcccttaagtcaaaggcgtccaagaagcttgatttcaaactgtct
gagccagtgaagataatttattgcgggaaggagcttgaagatgataaatctctttctgcg
cagaatgttccaccaaactctgtgctgcatcttgttcgtactaggataaatttgttgcct
agggcacaaaagcttcccggtgagaacaagtccatgcgtcctcctggggcatttaagaaa
aaatctgatctttccgtgaaagatggccatgttttcctcatggaatactgtgaggagaga
cctttgctccttggaaatgctggaatgggtgcaagattgtgtacttattaccaaaaatca
tctccaaatgatcagaagggcaccttgatgcgcaacgaaaatactggattggggagtgtg
ctcatacttgatcctgctgataaatcccccttccttggggatataaaacctggttgtagc
cagtcatccctcgaaacaaatatgtacagggcaccaatttttcagcagaaggtctcatca
actgattatttgttggttcgctcagcaaagggtaagctgtccataaggcggatagacagg
attgatgtcgtagggcaacaggagcctcacatggaggtaatctctcccggatccaaaggt
gttcagacctacataatgaacagattattggtctatatgtatcgtgaatttcgtgctatt
gaaaaacggggttcacgtcctttcatccgcgcggatgagctgtctgcacagttccctagc
ttgtcagaggcctttcttaggaaaaggctcaaacattgtgctgatttgcagagaagatca
aatggacagctccaatgggttatgaggttcaattttcggattccgtccgaggaggaactg
aggaggctggtttcaccggaaagtgtgtgtgcatatgaaagcatgcaagctggtctttat
aggcttaagcgcctaggtattacgcggctaactcatcctacaggcctatcagctgcaatg
aatcagctcccagatgaagcaattgctttagctgctgcatcgcatattgaaagggagctt
caaatcacaccttggaacttgagtagcaactttgttgcctgtacaaaccaggatagagaa
aatattgagcgactggaaattactggtgttggtgatccatccggtcggggattagggttc
agttacgtccgcaccactcctaaggcaccaatatcaaatgcaatctccaagaaaaaagca
gttgttgctaaagggtcaacagtaacaggcactgatgcagatctaagaagactgagcatg
gaagctgcacgcgaggttcttctcaagtttaatgttccagaggagcagattgctaaacta
acaaggtggcaccgaattgctatgattcgcaagctctccagcgagcaagctgcatcaggt
gtcaaagttgatccgacaacgataagcaaatatgcacgtgggcagcgcatgtcctttttg
cagctgcagcagcaaaccagagaaaaatgtcaggagatctgggaccgacaagtccaaaat
cttagtgctgttgatggtgaagaaaatgagagtgactctgaagtgaacagtgacctggac
tcatttgctggtgacttggaaaatcttcttgacgcagaggaatgcgaggatggtgaggag
ggtagtcatgagcccaaacatgataatgtagacggtgtcaaaggactcaagatgagaaga
cgctccattcaagctcaggtggaagaggaaatcgaggatgaggcagctgaagctgcagaa
ttatgccgcatgctcatggatgatgaagaagctgatcgaaagaagaaaaaaaaggagaaa
gtcatgggggagcaaattggtgtcatgccagatttaagatacaggtttggtacagaaagc
actgatcggggtaaaaaacctcaaatattttccaagccaagcatcaagtctgatcggtca
aatgcattggatttcactggagatcagaaggagctgcaggctgaagtgttttctactaaa
agaaccctatctagcaaggtgaaacccaagaaaaaatttgatatcgtggacactggatta
ttcaataaaaaggttaaaatactaggggatggaataaagcccgtgaaagagaagaagtca
gcaagagacagttttgtctgtggggcctgtggtcagcttggtcacatgagaactaataag
aattgtcccaagtatggggaagatgtggatgcacgagcagaaagcactgatttggaaaag
actacaggaaaagctattagttctatcgatcccttggatcatccacagatcttctcaaag
aaagtcatccaaaaaagtggaacaaagaatgtgatgatcgaagctcatgaggatgataat
tccagttcaaaggccaaagttctgaaggtcaaatgtggctcaaccgacaagcttcttgat
aaacctactcctgccacctcatttaattctgacatgccagtgacttcagatgctgaaact
ggaactgtaccaccccccataaaattcaataaaataaagttttcaaataagatgagagca
gaggatatttccaatgaagctcacaagccctctattctgataaggccaccaacagaaact
gcagactcacatcgcagcaagaaaattgtaattaagcaacttaaggactctgcaagtgtg
gatgaaagctttctggaaggaagcagtggcatggatttcaggaagacaaagaaaatcaat
gaattgtcgtacttggggcagcaagatagggaacacttttatgaagaggctttagaaagg
aaaagaatggatgataagcgattatgggaagaggaagagaggaggagagttgctgtgaga
caaagagaagaaagagccaaaatgatatatgagcgacagaaggcactagaggagcaggag
aaattagcggcaattgaaagctatcaagatgccataagaagagagagggaagaagaagaa
cgtctaaaggaaaagaagaagaaaaagaagaagcctgaaataagagatgattacttggac
gattttcttcccagaagaaatgacagaaggataccagatcgagacagatcggtgaagcgg
aggcaacctttagagtccggaaggcatgctaaagagcatgcaccgccagcaaagcgccga
agagcgggagaggttggtttgtcaaatattttggaagaaattgttgacacactgaagtca
aatgtggaagtatcttacctcttcttaaaaccagtgacccgaaaggaagctccagattat
cacaagtatgtaaagcgtcctatggacctatctacaatcaaagagaaggccaggaaacta
gaatataaaaaccgcgggcaattcaggcatgatgtggcacagatcaccatcaatgcacat
atatacaatgatgggcgcaacccaggtattccccctcttgctgatcagcttctagagatt
tgtgactacttgctggaagagaatgattccatcttagctgaagctgaagctggtattgag
cgataa
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integrated database retrieval system
