Nicotiana sylvestris (wood tobacco): 104234560
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Entry
104234560 CDS
T05026
Name
(RefSeq) mRNA export factor GLE1-like isoform X1
KO
K18723
nucleoporin GLE1
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03013
Nucleocytoplasmic transport
nsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104234560
03015 mRNA surveillance pathway
104234560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104234560
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104234560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
DUF4633
Motif
Other DBs
NCBI-GeneID:
104234560
NCBI-ProteinID:
XP_009786445
UniProt:
A0A1U7XHM2
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Position
10:113094947..113111986
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AA seq
670 aa
AA seq
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MGAVKLQLPLPKNVDGVTLDPNPDWSFDALLVELNSIEKKLNGSSKFPLPFIKAESRELS
ASKNNSQRGFIMQVSDDDVVDVERDTKDEVGDHFVKGRKRFACDEIYLSDSDHSEEGLGI
ELQHDLMDKVGLVESALSELAHEHQLTIAEEMRDQLSALEAEVMDENEKLASTLERVERN
TEAQREMSRKFDMQYQRKIAEALDDHLTAVQRDHEHRSQIEERRIRDDAAREEAKRKEKA
LQEEKARQEMIRAEAKVQARLEAERVEKEKAAALEAERKAAKEAAAAAEKASESLMNAPS
EANKVPKDVTSHKHSAVVLSFQMIHQMTEGGNTIRASENAQKLEEKRLMIYNEIASQNEA
LGSGSNKVKQATLRGAFVFQICFQEDRACRKYEMEIARRIRTITGTKENVRVKADELIKL
ISDSTCPQSISIAMFAQKVVSLCVNPTGSFNSAVYAYGRVIVLVTSKVPLAMDILIGELN
KVCIYAVPKYIIYSEAAFQTKEAYYKAIGYTEEDGKIESTDSYVDRLSAYMKLYGALVQT
EVEGCQNLHGLREGWAWIARFLNVLPANLYTAAALQAFLEMAGFALHKRYKTQFRKMLDV
IAKDFLTALKDRGDAKLNKVIVNIRNYIESNQFLKEPEGWRLRSNLESHNFTPESDHQQQ
YGYQQNRYYY
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgttaaactgcaacttccgttgcctaaaaatgttgatggagtgaccctggat
ccaaaccctgattggagctttgatgctttactggtcgagctcaactcgatagagaagaag
ctcaatggatcatcgaaatttccattaccttttatcaaagcagaatctcgagaactatcg
gcttcaaagaataattctcagagaggctttattatgcaagtgtctgatgacgacgtggtg
gatgtggaaagagacactaaggatgaagttggtgatcattttgttaaggggagaaaacgt
tttgcctgtgacgaaatctatctgagtgatagcgaccattctgaagaaggcctgggcatt
gaacttcaacatgatctaatggataaagtgggattagtggaaagtgctttatctgaacta
gctcatgagcaccagcttactattgcggaggaaatgagagatcaactatcagcacttgaa
gctgaggtaatggatgaaaatgagaagcttgcctctacacttgaacgggttgagagaaat
actgaagctcaaagggaaatgagcagaaaatttgacatgcagtaccagcgtaaaattgca
gaagcacttgatgatcacctaactgctgtacaaagggatcacgaacacagatcccaaatt
gaagaaaggagaataagagatgatgctgctcgtgaagaagccaagaggaaagaaaaagct
cttcaagaagaaaaagcccggcaagaaatgatcagagcagaagccaaggtgcaggctagg
ctggaagctgaaagagttgaaaaggaaaaagccgcagctctggaagctgagaggaaagca
gcaaaagaagctgcagctgctgcggagaaggcatctgagtcattgatgaatgctccttcg
gaggctaacaaggttccaaaggatgtcactagtcataaacattcagcagtggtcctttcc
ttccaaatgatccaccagatgactgaaggcggaaatacaatcagggcgtcagaaaatgct
caaaagctggaggagaaaagattgatgatttacaatgaaatagcttcccagaatgaagca
ctgggatcgggttctaataaggtaaaacaagctaccttgagaggggcttttgtattccag
atttgcttccaagaagacagagcttgccgaaaatatgaaatggaaatagccagaagaatc
cgaactataactggtacaaaagaaaatgtcagagtgaaagcagatgaattaattaagctt
atcagtgattcaacatgtccacaatccatcagcattgccatgtttgcacagaaggttgtg
tcgctgtgtgtgaaccctacaggaagctttaacagtgctgtctatgcgtatggtcgtgta
attgtccttgttacttcaaaggtccctcttgccatggatattctcataggcgagttgaat
aaagtttgcatttacgcagttcctaagtacattatttactcagaggcagcatttcagaca
aaagaagcttattacaaagctattggctacacagaggaagatgggaagatagaaagtact
gatagttatgtggatcgcttaagtgcatacatgaagttatatggtgctcttgttcagact
gaagttgaaggctgccaaaacttgcatggcctcagagaaggttgggcatggatagccaga
ttcttaaatgttctcccagcaaatttatatactgcagctgccttgcaggcttttcttgaa
atggcaggctttgctctacacaaaagatacaagacacaattcagaaagatgttggacgtc
attgctaaagattttctaactgcattgaaagatcgaggtgatgcaaagttgaacaaggtg
attgtgaatatccgcaactatatagagtcaaatcagtttctgaaggaacctgaaggctgg
cgcctaaggagtaacttggaatcacacaatttcactccagagtcggatcatcaacagcag
tatggttaccaacagaatagatactattactag
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