KEGG   Nicotiana sylvestris (wood tobacco): 104234835
Entry
104234835         CDS       T05026                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nsy03036]
    104234835
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104234835
Chromosome and associated proteins [BR:nsy03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    104234835
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     104234835
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_2 HEAT_EZ HEAT_EF3_N SHQ1
Other DBs
NCBI-GeneID: 104234835
NCBI-ProteinID: XP_009786774
UniProt: A0A1U7XIJ1
LinkDB
Position
3:194489430..194510567
AA seq 1140 aa
MAATPTIEYVNHIESYVSSSSSPAQQAASIDAIALLLKNDLLTLEVLVREMEMYLTTTDN
IIRSRGILLLGELLMRLISKPLGDTAISSLVEFFTERLADWKALHGALVGCLALLRRKSD
AGMINKSQAKAVAQSYLQNLQVQLLGLQDRKLCLQLLECLLDCYPDALLSLGDDLVYGIC
EAIDGEKDPQCLMLIFRVVEVLAQLFPESSGPLANFAGDLFDILGCYFPIHFTHPKGDEI
DVKREELSRALMLAFASTPLFEPSAIPLLLEKISSSLPSAKVESFKYLSYCTLKYGGDRM
EKYTESLWSALKNAIFTCPHSILSVDSYTIDGIGFHESEIMAQAHELLQVLVQQHNASFL
NLILGDGDISTFLKSFSQFNDFNSLSSEYKQRLHAVARILSVCVKSSGSSCNKVFESFFP
RLVDALRFSVENSPEAIHSALDAKFNFGALYLCVELLAACRQLVVSSDKVASAPDLSHDT
WCQILHSFSTSLCNVFFCLIRASCAEITWNAYVYAAVKGLEILATFPGSFISASKFMYEK
ILLTLMSIIESDFNKTFLWKAALKVLVEISLFVNKYDEDVKAASFNSIVMQKIVSLISSG
DLNMPLSLKIQAIFDIGMTRKSFMLAAASQLEKTISANLSEIFVHGNLQLAELTAVLLEC
YSIKVLPWFHCNGGADEVSLNFAVNIFAKMENITSLSLGVKGNEFLDATMAAMKQAVAGC
SMESQEKVLRKAFDVMATCSLFLSKDLILGTNRFNEKSQLCQTFDGLSCRDEWITSLFAS
VVIALRPQTRIPNIRLLLQLLTTTLLEGHLPSAQALGSLVNKLPVNISENCSLEEVIDTL
FKNEMWCNIIIGKECNDGGAVNMGNPRISSMNSHAVIGLAWIGKGLLMRGHEKLKDVTMT
FLSYLVSSGHNRNLLPFKDQIKDGAEHEVLCLRKSAADAFHILMSDSDACLNRNYHAIIR
PLYKQRFFNIMLPMFLSAIVKCDSSTTRCFLYQAFAHLISETPLAAIVGDAKKVLPVLLD
CFLMLSKDVSHKEIIYSVIIVLSGIITDKNGQEAIVENAPTVICRLTELTSYPHMMVIRE
TAIQCLAAMSEFPYARIYPMRTQVLQALSKALDDTKRVVRQEAVKCRQAWASIASRSLHF
NT seq 3423 nt   +upstreamnt  +downstreamnt
atggcagcgactcctacaattgagtatgtcaatcacattgagtcttacgttagctcttcc
agctctccggcacagcaggcggcaagcattgatgcaattgctcttcttctgaaaaatgac
ctgttaactttagaagtcttggttagagaaatggagatgtatttgaccactacagataat
atcattcgttcaagaggtatcctcttacttggagaactattgatgcgactaatatcgaag
cccttgggtgatactgcaataagcagcttagtggaattcttcacagagaggctggcagac
tggaaagcgttgcatggtgcccttgttggttgtttggctcttctaaggaggaaaagtgat
gctggcatgatcaataaaagtcaagcaaaggccgttgcgcagtcttatctgcaaaacctg
caggtgcagttattgggactgcaagacaggaagctttgtcttcaactattggaatgccta
ttggattgttatccggatgcccttttgtcactgggtgatgatcttgtatatggaatctgt
gaagctattgatggtgaaaaggacccacaatgcttgatgctcatatttcgtgtagttgaa
gttctggcacaattatttcccgaatcttctggcccattggcgaattttgcaggggatctg
ttcgatattttgggatgttactttcctatccattttacccatcctaaaggtgatgaaatt
gatgtaaagagggaggaactctcaagagccctaatgctggcgtttgcttccacgccactt
tttgaaccctcagccattccattacttcttgaaaaaatatcttcttctctgccatcagca
aaggtggaatcttttaagtaccttagctactgcacattgaaatatggaggagatagaatg
gaaaaatacaccgaatccctttggtctgcattgaaaaatgcaatatttacttgtccgcac
tccattttgtcagtggattcctatacaatagatggaataggttttcatgagagtgaaatt
atggcgcaggcccatgaacttctccaggtgcttgttcagcagcataatgcgtcattctta
aatttgattctgggtgatggggacataagcacatttctaaagtccttttcccagttcaac
gatttcaatagtctttcttctgaatacaagcagagattacatgcagttgctcgtattctt
tctgtttgtgttaaatcttctgggtcttcctgcaataaagtttttgaaagtttctttcct
cggttggtggatgctttaaggttctcggttgaaaattcccccgaggctattcattcagct
ttggatgcaaaatttaacttcggagccttgtatctttgtgtcgaactccttgctgcatgc
agacagctggtagtcagctccgataaagtcgcttcagctccggatctatcacatgacact
tggtgccagatacttcatagtttctccacatcattatgcaatgttttcttttgtctcatt
cgagcaagttgtgctgaaatcacttggaatgcttatgtttatgcagcagttaaaggtttg
gagatcttggctacatttcctggaagctttatttcagcgtcaaagttcatgtatgagaaa
atcctgctgactttgatgtcaatcattgaatctgatttcaacaagacatttctatggaag
gcagcgttgaaagttttagtggaaatcagcttgtttgtcaataagtatgacgaggatgta
aaggcagctagctttaacagtattgtcatgcaaaagattgtttctctaatttcttcgggt
gacttaaatatgccgctatcactcaagatacaggccatttttgacattggaatgaccagg
aagagtttcatgcttgctgctgcaagccaattggagaagactatatctgccaacttatct
gagatttttgtccatggaaatctgcagttagctgaactgacagctgtgcttttggaatgt
tattccattaaggtacttccatggttccattgcaatggaggtgcagacgaggtctctttg
aattttgcagttaatatttttgctaaaatggaaaatatcacatctttgagtctaggagta
aagggaaatgagtttctggacgcaacaatggctgcaatgaagcaagctgtggcaggctgt
tcaatggaaagccaggaaaaggttcttcggaaagcttttgatgtgatggcaacatgctcc
ttattcctatccaaggatttgattctaggaaccaatcgctttaacgagaaaagtcaactt
tgtcagacttttgatggtttgtcttgtcgagacgaatggattacttcactcttcgcatca
gttgtaattgcgttgcgtcctcaaactcgaataccaaatataagactgttattacagttg
ttgacaacgactctccttgaaggtcatttaccgtcagctcaggccctggggtctttggtt
aacaaacttcctgtaaatatatcagaaaactgtagtctcgaagaagttattgatacgtta
ttcaagaatgagatgtggtgcaacattattattgggaaagagtgcaatgatggtggtgct
gttaatatgggtaacccgagaataagcagtatgaatagtcatgctgttattggattagca
tggatagggaaaggtctgcttatgcggggtcatgagaagctaaaagatgtgactatgact
ttcttgagttacttagtttcaagcggacataatagaaatttgctgcctttcaaggatcaa
ataaaagatggcgcagagcatgaagtgctttgtctcagaaaatcagctgcggatgcattt
catattcttatgagcgactctgatgcttgtttgaacaggaattatcatgcaatcattcgc
ccactctataagcaacggtttttcaacattatgttgcctatgttcttatctgcaatagta
aaatgtgactcatccactacacggtgttttctttatcaagctttcgcacacctgatatca
gaaactcctcttgctgctattgttggtgatgccaaaaaggtccttcctgtacttttagat
tgctttcttatgttaagcaaggatgtctctcataaggagataatttacagtgtcataata
gttctctctggaataataacagataaaaatggacaagaagctattgtagaaaatgcgccc
acagttatctgccgacttactgagctcacatcctatccccatatgatggtgattcgagag
actgcaattcagtgccttgctgccatgtcagagtttccgtatgcaaggatataccccatg
agaacacaggtgttgcaagcattatccaaagctcttgatgatacaaagagggttgttcgt
caagaggcagtgaaatgtcggcaagcttgggcttcaattgcatcaaggagtttgcacttc
tga

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