Nicotiana sylvestris (wood tobacco): 104234878
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Entry
104234878 CDS
T05026
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104234878
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104234878
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
104234878
NCBI-ProteinID:
XP_070003441
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Position
5:complement(176129656..176135791)
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AA seq
671 aa
AA seq
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MQMMGFKKQNGIVLWCFAIVFHFFLLVNGSRVQHSRNTLSKESRKLQQVSPPVTMTIISG
YVVIDNGILQLSLTNPTGAIVGIKYNGIDNLLEPLQETQRGYWDTVWNGRFDTLFASSFS
VIAQDDNKVEVSFTKSYNPLDAGSAPLNVDKRYIVLRGSSGFYSYGIIEHLKGWPDVMLD
ELRIAFKLSKSLFHYMAISDDRQRVMPSEEDRASGQVLDFKEAVKLTNPSNPKLKDEVDD
KYQYSDEIKNIKVHGWISDTPHMGFWVISPSYEYCNGGPMKQDLSSHVGPTSMAIFFSSH
YAAPLLGVSLTNGEAWRKVFGPVFFYVNSDSGIDHTVLWEDAKRQMNEETTKWPYDFPAS
IDYPHANERGSVSGQLVVHDGYINKDPFPAKNAYIGLANPGVLGSWQSETKGYQFWTQTD
DSGYFKIINVRPGIYSVYSWVPGIIGDYMFSSYISITPGNNIDLGQIVFEAPRNGPTLWE
IGFPDRTAAEFFIPDPLPSLQNYLYINTTIHKFRQYGLWNRYADLYPNGDLVFKIGVSDY
RKDWFFAHVTRRNLDNTYGPTTWQISFDLTNVDPNGIYYLRIALASASYGHLQVWINTPS
KPRPWFDTLQIGQSNAIARHGIHGLYMTFDIQIPGTLLQIGENIIYLKQASANGPFNGLM
YDYIRLEGPPQ
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgatgggtttcaaaaagcaaaacgggatagttttgtggtgttttgctattgtt
ttccattttttcttgcttgtcaatggttcaagggtgcaacattctaggaatactctatcc
aaagagagtcgaaagctgcaacaagtttctcctccggtcacaatgacgatcataagtggc
tatgtggtaattgataatggcattctgcaactttctctaacaaatcccactggagcgatt
gttggaataaaatataacgggatcgataatctcttagaacccttgcaagaaactcagagg
ggatactgggatactgtatggaacggtcgttttgacacactatttgcgtcaagttttagt
gtaatagcacaagatgataacaaagttgaagtttctttcacaaaatcatataatcctttg
gatgctggtagtgctcctctaaatgttgacaaaaggtatatagtgctgcgtgggagttct
ggattttattcatatggaataattgaacacttgaaaggatggcctgatgttatgttggat
gaacttagaattgctttcaagctcagcaagtcactgttccattatatggcaatatcagac
gataggcaaagggtaatgccatcagaagaggatcgcgcaagcggccaagtacttgatttt
aaagaagctgttaaactcacaaatccatccaaccctaaactcaaagatgaggtggatgac
aagtaccaatactcagatgagattaaaaatattaaagtacatggatggataagtgatact
ccacatatggggttttgggtaatctcaccaagttatgaatattgcaatggtggtcctatg
aagcaagatctttcttctcacgttggtccaacgtctatggcaatatttttcagtagtcat
tatgcagcaccactattgggagtttcactaacaaatggagaggcatggagaaaggttttt
ggccctgtatttttctatgttaattcagattctggcattgatcataccgtactttgggaa
gatgccaaaagacagatgaatgaagaaactacaaaatggccatatgattttccagcatca
atagactatccccatgcaaatgaaaggggctcagttagcggtcaattagtggtccatgac
gggtacataaacaaagatccttttcctgcaaaaaatgcatatattggacttgctaatcct
ggagttcttggatcttggcaaagtgagaccaagggttatcaattttggactcaaactgat
gattctggttatttcaagataattaatgttagacctggaatttatagtgtatattcttgg
gttcctggaattattggagattacatgttctcctcttatatatccattacaccaggaaat
aacatagatttaggtcaaatagtttttgaagctccaagaaatggtccaactctatgggaa
attggcttccctgatagaactgctgctgaattctttatacctgatccattgcctagtctt
cagaattatttgtacattaacactactatacataagtttagacaatatggtttatggaat
cgttacgcggatttgtatcctaatggagatttagtattcaaaattggtgttagtgattat
cgaaaagattggttctttgcccatgtaaccaggagaaatttggacaatacttatggacca
acaacatggcaaatttcatttgatcttacaaatgtggatcctaatggcatttactatctt
cgtatagctttggcttctgcatcctatggccatttgcaagtgtggataaacactccctca
aaaccaaggccatggtttgatactttacaaattgggcaaagtaatgcaatagccagacat
ggaattcatggcttgtatatgaccttcgatattcaaattccagggactttacttcaaatt
ggtgaaaatataatatatttgaagcaagcttcagctaatggtccttttaatggactaatg
tatgactatattcgtcttgaaggtcctccacaataa
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