KEGG   Nicotiana sylvestris (wood tobacco): 104235044
Entry
104235044         CDS       T05026                                 
Name
(RefSeq) SKP1-like protein 12
  KO
K03094  S-phase kinase-associated protein 1
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03083  Polycomb repressive complex
nsy04120  Ubiquitin mediated proteolysis
nsy04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104235044
   04120 Ubiquitin mediated proteolysis
    104235044
  09126 Chromosome
   03083 Polycomb repressive complex
    104235044
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nsy04131]
    104235044
   04121 Ubiquitin system [BR:nsy04121]
    104235044
   03036 Chromosome and associated proteins [BR:nsy03036]
    104235044
Membrane trafficking [BR:nsy04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    104235044
Ubiquitin system [BR:nsy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     104235044
   Cul7 complex
     104235044
Chromosome and associated proteins [BR:nsy03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     104235044
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     104235044
SSDB
Motif
Pfam: Skp1 Skp1_POZ DUF4901 DUF5033 DarP EFL1
Other DBs
NCBI-GeneID: 104235044
NCBI-ProteinID: XP_009787015
UniProt: A0A1U7XKJ9
LinkDB
Position
5:167636393..167637215
AA seq 170 aa
MAASSSASTAASAEKKMLILKSSDGDEFQLEEKAVVQSITIKNMVEDDYTLIPLPNVDTK
NLTKVTEYLKMHADEMTESNKEEIEKFDKEFVNATFQDLFELVLAANYLDIKGLMDLLCQ
AIADRIKNKSYKAVRKIFNITNDYTPEEEEEVRKEHEWAHEGVEWDESTD
NT seq 513 nt   +upstreamnt  +downstreamnt
atggccgcctcctcatcagcatcaacagcagcatctgctgagaagaaaatgttgatctta
aaatcctctgacggcgacgaatttcagttagaagaaaaggccgtcgttcaatccataacc
ataaaaaacatggtggaggacgattacactctcattccgctcccaaacgtcgataccaaa
aacctaaccaaagttacagagtacctgaagatgcacgccgatgagatgacggagtccaac
aaagaagaaatcgaaaaattcgacaaggaattcgtgaatgctacctttcaagacctgttt
gaacttgtattggctgctaattaccttgatattaagggtttgatggatctgttgtgtcaa
gcgattgctgataggattaagaacaagtcgtataaagctgttaggaagattttcaatatc
actaatgattacactccagaggaagaggaagaggttaggaaggaacatgaatgggcacat
gaaggtgtagagtgggacgaatctactgattag

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