Nicotiana sylvestris (wood tobacco): 104235047
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Entry
104235047 CDS
T05026
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 53, mitochondrial-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsy03009
]
104235047
03036 Chromosome and associated proteins [BR:
nsy03036
]
104235047
Enzymes [BR:
nsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104235047
Ribosome biogenesis [BR:
nsy03009
]
Eukaryotic type
Pre-60S particles
Helicases
104235047
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104235047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104235047
NCBI-ProteinID:
XP_009787018
UniProt:
A0A1U7X848
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All DBs
Position
6:16469636..16476727
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AA seq
632 aa
AA seq
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MASLSTPLRYSKMNSLFLLRNTSSSLTSKRVTLNSLSHIFTDKFIPRNGLKVSQIHSFTT
SVTPSAAVSNWVNGNFGYSVRAFNVAATAFVELEEECDVDNGVGLEISKLGISEEIVSAL
AQRGITSLFPIQKAVLEPAMQGSDMIGRARTGTGKTLAFGIPIMDKIIKFNNKKGRGRNP
LALILAPTRELARQVEKEFYESAPGLDTLCVYGGVPIQRQMSTLQRGADIVVGTPGRIID
LLKRRSLNLSEIQFVVLDEADQMLNVGFAEDVETILENVRQKHQTMMFSATMPSWIMKIT
NKFLKKPIHIDLVGDSDQKLADGISLYSIACEMRQKPAVLGPLISEHAKGGKCIVFTQTK
RDADRLASAMQKTLRCEALHGDITQSQRERTLSGFRQGQFNVLVATDVAARGLDVPNVDL
VIHYELPNSSEIFVHRSGRTGRAGKKGSAILMHSSKQHRDLKGIEHDAGCRFTELPSIKV
EAGAADMYSDMGKGSDRFGSYGGTMRSRSGDFGGSRSGGYGNKGSRFGGEGASSSRTGGY
SGTGSGRSGGGYGGTSSGSSGKFGGSGGSKRLGGFRNFGSGRSSRFGDSQSDRNNRSSRF
DDFGDGKDSGDQSSGRNSISRRRAPWDFSINR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcttccctctccactcctttaagatacagcaaaatgaatagtctttttctactaaga
aacacttcatcttcactaacctcaaaaagggtcaccttaaattcactttcccatatcttt
actgataaattcattccaagaaatgggcttaaagtttcacaaattcacagctttaccact
tctgtaactccatcagcagcagtgtcgaattgggttaatggtaattttgggtatagtgtg
agggcatttaatgtggctgctactgcgtttgtagaattagaagaagagtgtgatgttgat
aatggggttgggcttgagatatcaaagctgggtatttctgaggaaattgtttctgctttg
gcacaaaggggaattacttctctttttcctattcagaaagctgttttggaaccagcaatg
caggggtcggacatgattggccgagctagaactggaactggaaagacactagcttttggc
attcctatcatggataagatcatcaaattcaacaacaaaaaaggacggggaagaaaccct
ttagcattgatcttggctcccactagagaacttgcacgccaggtggagaaagaattttat
gaatctgctcccggtttggatacactgtgtgtttatggtggtgtccccattcaacgccaa
atgagtactcttcaaaggggtgcagacattgttgttggaacacctggtcgaatcattgat
ctgctgaagaggaggtccttaaatttatcagaaatccagttcgttgttctagatgaagct
gatcagatgcttaatgtgggcttcgcggaggatgttgaaaccattcttgaaaatgttcgg
cagaaacatcagacgatgatgttttcagccacaatgccaagttggataatgaaaattacc
aacaagttcttgaagaagccaattcacattgatcttgtaggggattctgaccagaaatta
gccgatggcatttccttgtattcaattgcttgtgagatgcgtcagaaaccagcagttctt
ggacccttaatatcagagcatgcaaaaggaggcaagtgtattgtgtttacccaaacaaag
cgtgatgctgatagattggcgagtgcaatgcaaaaaactttgagatgtgaagctttgcat
ggggatatcacgcaaagccagagggagagaactctgtccggtttccgacaaggtcaattc
aatgtattagtggccactgatgttgctgctcgaggacttgatgtacctaatgttgatctg
gtgatacattatgaacttccgaactcttcagagatctttgttcatcgatctggtcgaacc
ggacgtgctgggaagaaaggaagtgccattctcatgcattcctcaaaacagcacagggat
ttgaaaggtattgaacatgatgccgggtgcagatttactgagctcccaagtattaaagta
gaggctggagcagcagacatgtatagtgacatgggcaaaggcagcgaccgctttggctcc
tatggaggcaccatgcgtagtcgatctggtgattttggtggaagtcgttctggtggctat
ggaaataaaggcagcagatttggtggagaaggcgcttcatcttctcgaacaggtggatac
agtggaactggttctggaagatcagggggtggctatggtggaactagctcaggcagctca
ggaaagtttggtggttctggaggatcaaaacgtttgggtggtttccgtaactttggttct
ggccgttcaagtagatttggagattcacagtctgaccgcaataaccgttcaagccgtttt
gatgacttcggagatggcaaggatagtggtgatcagagttcagggaggaactccatttca
aggaggcgtgccccctgggacttctccattaatagatga
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