Nicotiana sylvestris (wood tobacco): 104235248
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Entry
104235248 CDS
T05026
Name
(RefSeq) chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X1
KO
K27707
chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsy03041
]
104235248
Spliceosome [BR:
nsy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104235248
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
104235248
NCBI-ProteinID:
XP_009787271
UniProt:
A0A1U7XC87
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Position
2:complement(92862250..92875995)
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AA seq
796 aa
AA seq
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MSATLFLAPNSNFIIKPKTILSLNSFSSKVTSFSSKPNDNNHPDKNLFENQDYESTSNPI
SRSSSGIKGPTAPWMRGPLLVEPNQVLDLSKSRKKKDANFPKTQNPSDALSGKVSGGRGK
KAMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPASLSNWKDVNFQFNEQTPYVKKDK
VERVEFDILSGESEGRSGEKMPWESEERIVYRRMKKEKVLTAAELKLDSVLLERLRGEAG
QIQKWVKVKKAGVTQVVVHQIHLLWKNNELAMLKFDLPLCRNMDRAQEIIEMKTGGFVVW
RKKNALVVYRGCDYTLRQKDDPKRLHDFLRSQQNSSSTDTFKKTSAFLSSNSSRSSVDVI
SGESSEDDSLTINESLFEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVVPGFKPPFR
LCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLAAAVIKLWEKCHIAKIALKW
GIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELRICQLE
EEAARFKAIETLPITTGESMSSSNVGTLSEFQTIAEPGREKSETEVQLVAEKERLEKELR
DEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKEILTQEERRSLRQIGLKMDRSLVL
GRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSHVIHTANLLEAESGGILVSVDKLKEGH
AIVIYRGKNYRRPELVPQNLLNKRQALSRSLEMQRLGSLKFYANQTEQAISDLKCKLVEY
TVKIGQMGEDLKASGA
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctactctatttctagctcccaattccaattttattatcaagcccaaaacaatt
ctttctttaaattcattcagttcgaaagttacctccttttcctccaaacccaatgataat
aatcatcccgacaaaaacttatttgaaaatcaagattatgagtcaacatcaaaccctatt
tcacgttcaagttcaggaattaaaggccctactgctccatggatgaggggtcctcttctt
gttgaacccaatcaagttttggacttatccaaatcaagaaagaagaaagatgccaacttt
cctaaaacccaaaatcctagtgatgcactttctggtaaagttagtggaggaagaggtaaa
aaggcaatgaagaagatttatcaaagcattgataagctccaagaaacacaaaatttggaa
tttacacatgtggaaactgatgctaagtttgaatttcagttcccacctgcttctttatct
aattggaaagatgtgaactttcaatttaatgaacaaactccatatgtgaaaaaggacaaa
gtggaaagagtggaatttgatattttatcaggagagagtgaaggaagaagtggagagaaa
atgccatgggagagtgaggagagaattgtatataggagaatgaagaaggagaaagtttta
acagctgctgagttgaaacttgattcagtgttgcttgagagattgaggggtgaggctgga
cagattcagaagtgggtgaaggttaagaaagcaggagtgacacaagttgttgttcaccaa
atccacttgctttggaagaataatgaacttgcaatgctcaaatttgacctgcctttatgt
cgtaatatggacagagctcaagaaattattgagatgaagactggaggctttgtagtttgg
aggaagaaaaatgctctagttgtttatagaggatgtgattatactttgagacagaaggat
gaccccaaacgacttcatgattttctccgtagtcaacaaaacagttcatctactgatacc
tttaaaaagacaagtgctttcttgtcgtcgaactcaagtaggagcagtgtagatgtgata
agtggtgaaagctcagaagacgatagcctaacaataaatgagtcactctttgagagggaa
gctaatagattattggatgacttaggacctcgttatgttgattggtggtggccaaagcct
ttacctgtggatgcagatttgcttcctgaagtggttcctggatttaagccaccatttaga
ctttgcccaccacgttcaagatcaaagcttactgatgatgaacttacacacttaagaaag
cttgctcgttctttgccaactcattttgtcctcgggagaaacagaaaactgcaaggcttg
gctgcagccgtcataaaattgtgggagaaatgtcatattgcaaagatagctttgaagtgg
ggaattccaaatactaacaatgagctaatggcaaatgagctgaagtatcttactggagga
gttcttttattgcggaataagttctttataatcctatacagaggtaaggattttcttcct
tctcaagttgcaagccttgtagctgagagggaagtggaactcagaatatgtcagcttgag
gaagaagctgcacgattcaaagcaattgaaacccttccaatcactactggagaatcaatg
agcagtagtaatgttgggactttatcagaattccagacaattgcagaacctggaagggag
aaatctgagactgaagttcaattagtagcagaaaaagaaagattagaaaaagaactgaga
gatgaacagcacagcctttacattctcaagaagaagattgaaaaatcatctatagcattg
ggaaagttggatgctgcatggagacctgccaaaccagatgtcgataaagaaatcttaaca
caagaagagagacgatctcttaggcagataggattgaagatggacaggagtttagtgctt
gggagacgcggtgtttttgatggtgtattagcgggtctccatcagcattggaagcacaga
gaagttgttaaggtgatcacaatgcagaaaatcttttctcacgtcattcatactgcaaat
ctcctagaggcagaaagtggtggaatactggtttctgtagacaaacttaaagaaggccat
gctatagtaatttatcggggaaagaactacagacgcccggaattggtgccgcaaaatctt
ttaaacaaaagacaagctttaagtcggtcccttgaaatgcagagacttggatcattgaag
ttttatgcaaatcaaactgagcaggcaatctctgatcttaagtgcaagttggtagaatat
acagtaaagattggtcaaatgggggaagatctaaaagctagtggtgcataa
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