Nicotiana sylvestris (wood tobacco): 104235258
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Entry
104235258 CDS
T05026
Name
(RefSeq) uncharacterized protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104235258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104235258
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104235258
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
104235258
NCBI-ProteinID:
XP_009787282
UniProt:
A0A1U7X5A2
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Position
6:47497113..47511045
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AA seq
317 aa
AA seq
DB search
MANLPQSLSMLTAFGGGPGNTASASAAATQDRNKMQSAEQLVLELSNPDLRENALLELSK
KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHP
DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
PLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGSMVGALAEQP
SSRLLKHIIRCYLRLSDNPRACDALRNCLPDMLRDATFSSCLREDPTTRRWLQQLIHNVN
GSRVALQAGGFDHLLVN
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacctgcctcagtcactctcaatgctcaccgcctttggaggaggaccgggcaac
acagcctcggcatctgccgctgcaactcaggaccgtaacaaaatgcaatcagcagagcaa
ctcgtgcttgaactcagcaaccccgatcttcgagaaaatgcccttcttgaactttctaag
aagagggaattattccaggacttagccccattgctatggaactcatttggtactatcgct
gcgctcttacaggagatagtttccatctaccctgttttgtcaccgccaaacctgactcca
gcacaatctaatagagtttgtaatgctttagcacttcttcagtgtgtagcctctcaccct
gacaccagaatgttgttcctcaatgcacatattcctttgtatttgtacccttttctaaat
acaacaagcaaatcaagaccttttgaatatttgaggcttactagcttaggtgtcattggt
gcccttgtgaaggtagatgatactgaagtaatcagttttctactatcaacagaaataatt
cccttgtgtctgcgcacaatggagatgggcagtgaactgtcaaaaacggttgcaactttc
attgtgcaaaaaatacttctagatgatgtgggtctggattacatatgcaccacagcagag
aggttttttgcagtcggccgagttttagggagtatggtaggtgcacttgctgaacagcct
tcatcaagattactgaagcacataattaggtgctatcttcggttgtcagataatccaagg
gcatgtgatgcactaagaaattgtctccctgatatgcttagggatgccaccttcagtagt
tgtcttcgtgaggatcctacaacgaggaggtggctacagcaattgattcacaatgttaat
ggtagccgtgttgctctacaggcaggaggatttgatcatttgctggtgaactaa
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