Nicotiana sylvestris (wood tobacco): 104235344
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Entry
104235344 CDS
T05026
Name
(RefSeq) ABC transporter B family member 28 isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104235344
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nsy02000
]
104235344
Transporters [BR:
nsy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
104235344
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_30
ABC_ATPase
AAA_16
AAA_5
AAA_29
RsgA_GTPase
Zeta_toxin
AAA_25
AAA_28
AAA_33
DWNN
Rad17
AAA_15
DUF4284
Motif
Other DBs
NCBI-GeneID:
104235344
NCBI-ProteinID:
XP_009787382
UniProt:
A0A1U7X5K4
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Position
3:128593544..128602048
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AA seq
716 aa
AA seq
DB search
MASTVTNSFCLSLNPAITQWRRNQQVLIRRPSQFSISSTQRPFRPQSISCRKLKRSVISS
AYITGPAFDAIVSENDPKFEESDDSFVAVEPVEVISWGFMWKLVSRHKLRLIASVLTLIG
CTTCTLTMPLLSGRFFEVLIGTRPEPLLELLSKVGLLYALEPIFTIIYVVNMNSIWEKVM
SSLRAQIFQRVLIQKVEFFDRYKVGELTALLTTDLGSLKNIVSENTSRDRGFRALSEVVG
TLSLLFALSPQLAPILGVLMLTVSILVAVYKRTTVNVFKAHGLVQASIADSVAESFSAIR
TVRSFSGEKRQMSVFARQVLEYESSGIKLGTFKSFNESVTRVAVYISLMALYCLGGSKVK
AGEMSVGIVASFIGYTFTLTFAVQGLVNTFGDLRTAFAATERINSVLSGAEIDEALAYSL
EKDMKQKKVRDETLELYLVNGSNEKKQSTKTRYMSSLKLGSSVRSLAETGDICLEDVYFS
YPVRPDVEILCGLNLMLKCGTVTALVGPSGAGKSTVVQLLARFYEPTRGRITVAGEDLRT
FDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDEFVSKDDVIKAAKAANAHEFIISMPQ
GYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDTVSERLVQEALDHLMK
GRTTLVIAHRLSTVQNADQIALCSDGKIAELGTHFELLERKGQYASLVDTQRLAFE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggctagtactgtaactaactccttctgtctttctctcaaccccgccattacacaatgg
cggcgcaatcaacaagtcttaatccggcgaccatctcaattctctatctcttcaacacaa
cgtccatttcgcccacaatccattagttgccggaaactgaaacggtccgtgatatcttca
gcttacattacgggccctgcttttgatgctattgtttcagaaaacgatcctaaattcgaa
gaatcggatgatagtttcgtggcagttgagccagttgaagttatcagttggggttttatg
tggaaacttgtttctcgccacaagttgaggctcattgcttctgttctcactcttatcggc
tgtacaacttgtactctcaccatgcctttactttccggaagattttttgaagtacttatc
ggaacaagaccagagcctctgttggaactgctcagtaaagtgggacttctatatgcactg
gagccaatttttacaattatctatgtggtgaacatgaattccatttgggagaaggttatg
tccagcttaagggctcaaatttttcagagagtactgattcaaaaggttgagttttttgac
cgttacaaggttggtgagttaacagctctattaacaactgatcttggttcactcaaaaat
attgtcagtgagaatacttcacgggatcgtggttttagggcattatcagaggtggttgga
acattgtccttattgtttgctctatctcctcagcttgctccaattttgggcgtactcatg
ctcaccgtgtctattttagtcgctgtgtacaagaggacaactgtaaatgtcttcaaggct
catggactggtccaagcatcaatagctgattctgtggccgagtcattttctgccattcgc
actgtgaggtcatttagtggggagaagcgtcagatgtcagtgtttgctcgccaggtactc
gagtatgagagtagtggaataaagcttggaacgttcaaatccttcaatgagtcagtaact
agggtggcagtttatatctccttgatggctttgtattgccttggtggaagcaaagtaaag
gcaggtgaaatgtcagtgggaattgtggcttcatttatcggatacacttttacactaact
ttcgcagttcaaggcctcgtaaatacctttggagatcttcgtacagcttttgcagcaact
gagagaatcaactctgttttgtctggagctgaaattgatgaagcgcttgcatattcttta
gagaaagacatgaagcaaaagaaggtccgtgatgagactttagaattatacttggtgaat
ggttctaatgagaagaaacaatctaccaaaacaagatacatgtcttccttaaaattgggt
agcagtgtgcgaagccttgcagagacaggtgatatctgtcttgaagatgtgtatttctcg
tatccagtgaggcctgatgtggaaatcctctgtggtcttaatttaatgctaaaatgtgga
actgttacagctctggtgggaccaagtggtgcagggaaaagtacagtagtacaactatta
gcacgtttctatgagccaactcgaggccgcataactgttgcaggagaagatttgcgaaca
tttgataagagcgaatgggcacgggttgtctctatagtgaatcaagaacctgttcttttc
tctgtatcggttggagaaaatatcgcctatggtctccctgatgagtttgtatccaaggac
gatgtgataaaggcagccaaggctgccaatgctcacgagttcataatttcaatgccacag
ggttatgacacattggttggtgaacgtggtggcttgttgagtggtggacagaggcagagg
attgctattgcaagggctctactgaagaatgcccctattttgattctcgatgaggccact
agtgctttagacacagtaagtgagcgtctagtccaagaagcactggaccatctgatgaag
ggacgaacaactttggtaattgctcatagattgagcacagttcagaatgcagatcaaatt
gctctttgttctgatgggaagattgcggagttgggaacacactttgagttgttggagagg
aaaggccaatatgcttctctggttgacactcagaggctcgcatttgaataa
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