Nicotiana sylvestris (wood tobacco): 104235790
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Entry
104235790 CDS
T05026
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03440
Homologous recombination
nsy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104235790
03460 Fanconi anemia pathway
104235790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104235790
03036 Chromosome and associated proteins [BR:
nsy03036
]
104235790
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104235790
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104235790
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
104235790
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
104235790
FA (Fanconi anemia) pathway
Downstream FA components
104235790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
104235790
NCBI-ProteinID:
XP_009787913
UniProt:
A0A1U7XAM4
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Position
7:464999..475388
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AA seq
1140 aa
AA seq
DB search
MPTWQLYSVAGNDFRWKISDEETKIIEPSLALAAPQQLQSMADLLRQGSSKLAGSSDTSF
TANFPVFRTGSGKPVAVKQSSISRALSILNDKNNVVPDTGQGIGRENSFAFQEAAFQKGS
GKALNAPESFFPSGLEKKSNTSNSMFQTGSGKALSISSAGLNRAKALLDLEQNGDNATFQ
GSEKKNRSSDERFGFRSSVPSAAVEGIANTWSTKASAASLSPFDVKLNSSVCAAEEVVPD
FLHCSDKPPPIKFHTAGGRSISVSSEALKRARSLLGDPELGCLVDEKDVVDQLFSFPKDQ
KSVDQSSIKELNSDTPVSLLSAAKGSGSSSLFTPPVGSTLYHKKSSVKTENLAPASNLMK
EFDAVAKESTSRPDHSIPQHGEAFNRNSVAVGLRENDIHSKPKLLQRPSRGPLVDISNNI
GAGSADRNQNFGQKRKPGRGSFVSPFKKPRIAKIVTPLKRNDSGASNGFSNSAPQLSSQK
GKVSVRYPFHVARLYMKEYLGDPPSFQSKLENLPDEVRRMNPDIAETHVFNDKSCSGCIG
VKSFWEMLSQSGASMQYVSKEWVANHYKWIVWKLASYERCYSTKFSGKLLTICNVLEELK
YRYEREVNYGHRSAIKRILEGDAPPSSMMVLCVSKVYSICNSPVGSQFSLSNTTENGACA
KIELTDGWYSITAVLDILLSKKLAAGKLFVGQKLRIWGARFCGWTGPVSPLEASGMTSLL
LHINGTYRAHWASRLGLCKGGAIPLSFLSIKDGGGSVPLTLVGISRIYPVLYRERLSNGG
FVVRSERMEAKEMQSFNQRRCRVVEGITSESQRAKRDAYIGSDHESEEGARILKILERAA
EPELLMAEMSKEQLNAFASYQAMLEASRQSDLQKSLEKALQAAGLAERDVTPFMRVRVVG
LTSKSTPSKCCPQEGLITIWNPTEKQQSELAEGQAFAVTGLTPISSDLSTLYLQAKGSTA
KWRPLSPMAIEGFDSCRPFFCPRRSVPLSKLGEIPMSREFDIAAVIVFVGQLYTETHQSK
QWVFVADGSTSTLDSNDESETLMATSFTSPCIETDSFAPINPNLVGSVVSFCNLIKRARD
NVNNLWVAEATENSTYYLNFDHSHCSHLKEASASAERWAKISGSRLEKLRGKVLSIISCR
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgtggcagttgtactccgtcgccgggaatgatttccgatggaaaatctccgat
gaagagactaaaatcatagagccgagcttagccctagcagctcctcagcagctccaatcc
atggccgacctcttgcgtcaaggaagttcgaaattagcggggagtagtgatacaagtttc
acggcgaattttccagtttttcgaactggatccgggaagcctgtggcagtgaagcagtct
tcgatatctagagctctttcgatccttaatgataaaaacaatgtggtcccggacacagga
caagggattggaagagagaacagttttgcctttcaggaagctgcgttccagaaaggatca
gggaaagcacttaatgctccagaatcttttttcccttctggcttggagaaaaaatctaac
acgtcgaactcaatgttccagacaggctctggtaaagcacttagtatatcttccgccggt
cttaatagggccaaggcattgttggacttggaacaaaatggtgacaatgcaacatttcaa
ggttctgaaaagaaaaatcgatcttcagacgagcgctttgggtttcggagttcagttcct
tccgcggcagtagaggggattgctaacacatggtctactaaagcttcagcagcttcattg
tctccgtttgatgttaaacttaactcctcagtttgtgcagcggaggaggtagtaccagat
tttctgcattgttcagataagcctcctccgataaagtttcatactgctggtggtagatca
atatcagtttcttccgaggcattgaaacgtgcaaggagtctgcttggagatccagagctg
gggtgtcttgtagatgaaaaggatgtggttgatcaattgttttcttttccaaaagaccaa
aaatctgttgatcagtcctccattaaagaattaaactcagatactcctgtttccctctta
tcggcagcaaaaggcagtggctcgtcaagcctttttacacccccagttggatcaactttg
taccataagaagtcttcggttaaaacagagaatctcgctccagcaagtaacttgatgaag
gagtttgatgctgtggcaaaagaaagcacgagtaggccggaccatagtattcctcagcat
ggagaggcattcaacaggaactcagtagctgttggcctaagagaaaatgacatccattca
aaacctaaattgctacaaaggccttctagggggcctttggtggatatctcaaataacatt
ggagctggatctgcagatagaaaccaaaactttggtcagaagaggaaacctggaagggga
agttttgtttctccattcaagaagcctcgaattgccaaaattgtcacccctctcaaaaga
aacgattccggtgcttctaatggattctcaaattcagcaccacaattatcctcacaaaaa
ggaaaagtttcagttcgatatccattccacgttgcacgattgtatatgaaggagtatctt
ggggatcccccatcattccagagcaagctagagaatctgccagatgaagtgagaaggatg
aatccagatattgctgaaactcatgtgttcaatgataaatcttgctcaggttgcattgga
gtaaagtctttctgggagatgctgtctcaatcaggggcttctatgcaatatgtctctaaa
gagtgggttgcaaatcactataagtggattgtttggaaacttgcatcttatgagaggtgt
tatagtaccaagttttctgggaagcttttgacaatctgcaatgtacttgaagaattaaag
tacagatatgaaagagaagtaaattatggtcatcgatctgcaattaagagaattctagaa
ggagacgccccgccttcttctatgatggtgctctgcgtttccaaggtctattcaatttgc
aactccccagttggatctcaattttctttgtctaacacgaccgaaaatggagcttgtgca
aaaattgaactgacagatgggtggtattcaattactgctgtcttagatatactattatcc
aagaagttggctgctggaaagctgtttgttggccaaaagcttaggatctggggagctcga
ttctgtggctggacaggtcctgtttcacctcttgaggcgtcaggaatgactagtttgcta
ctgcatataaatgggacatatagagctcattgggcatctcgtttggggttatgtaaaggt
ggtgccattccattatcatttttgtcaatcaaggatggtggaggttctgttccacttaca
ttggtcggaatttcaaggatatatcctgttctctacagggaaaggttaagtaatgggggt
ttcgttgtaagatctgaaaggatggaagctaaagagatgcagtcttttaatcaaagacgc
tgtagagttgtggagggaataacctcagaatctcaaagggcaaagagagatgcgtacatt
ggaagtgaccatgaaagtgaagaaggggcaagaattttgaagatactagagagagctgca
gaaccagaacttctgatggcagagatgtctaaagagcagttgaatgcatttgcatcctat
caagcaatgttggaggcatcaaggcagtctgacctgcagaaatctcttgaaaaagctttg
caagctgctggacttgctgaaagagacgtcactccttttatgcgagttagagttgttgga
ttgactagcaaaagtactccatcgaagtgttgcccacaggaaggcttaattacaatttgg
aatccaactgagaaacagcaatccgagcttgcagagggtcaagcttttgctgttacaggg
cttacaccgataagctcagacttgagcaccctttatttgcaagcaaaagggtccacagcc
aaatggcggcctttgtctcctatggcaattgagggttttgattcctgcaggccctttttt
tgtcctcgacgatcagttccattgagtaaattgggtgaaattcctatgtccagggagttt
gatatcgctgcagtgattgtttttgtggggcagctgtatacagaaactcatcaaagtaag
cagtgggtatttgtagctgatggatccacatctacgttggattccaatgatgaatcagaa
accttgatggccactagcttcacctcaccatgcatagaaactgattcatttgcaccaata
aaccctaaccttgtagggtctgtggtttccttttgcaatctcatcaagagagcaagagat
aatgttaataacctctgggtagctgaagcaacagaaaattcgacctattatttaaatttt
gatcattcacattgttctcatctgaaagaagccagcgcttctgctgaaagatgggcaaag
atatctggttcgagacttgaaaagcttagggggaaagttctatctataattagctgccgc
tga
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