Nicotiana sylvestris (wood tobacco): 104236026
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Entry
104236026 CDS
T05026
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104236026
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104236026
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104236026
NCBI-ProteinID:
XP_009788173
UniProt:
A0A1U7XBC9
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Position
6:85885345..85887548
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AA seq
406 aa
AA seq
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MAISSFSLLFLLPYLLLVPPHFASSTLQNPQSVVDPVHRSINNASRRNLGYLSCGTGNPI
DDCWRCDPNWEKNRQRLAECAIGFGKNAIGGKDGKIYVVTDSGNDDPVNPKPGTLRYAVI
QNEPLWVIFARDMVIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGIHIH
DCKQGGNTMVRSSPQHYGWRTISDGDGVSIFGGSHIWVDHCSLSNCKDGLIDAIMGSTAI
TISNNYMTHHDKVMLLGHSDSHVQDKNMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSANPTINSQGNRFLAPDIRFSKEVTKHEDAPESEWKKWNWRTDGDLMLNG
AYFIQSGAAASSSYAKASSLSAKPSSLVTSIVSGAGALTCRKGSRC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccatctcctctttttctctccttttcctcctgccctatcttctcttagttcctccc
cattttgcctcttctaccttacaaaatccccaatctgttgttgatccagtacataggagt
ataaacaatgcctcaaggaggaacttgggctatctctcttgtggcacgggaaaccctata
gatgactgctggcgttgtgatcccaactgggaaaagaaccgccaaaggctagctgaatgt
gctattggctttggcaagaatgccattggcggcaaagacggcaagatttacgtggtcacc
gattccggcaacgacgatccggttaaccctaaaccgggcactctccgatatgctgtcatt
caaaacgagccattatgggtcatttttgctagggacatggtgatccaactgaaagaagaa
cttattatgaactcattcaagactattgatggaagaggagctagcgttcacattgcaggt
ggaccatgcataacaatacaatacgtgaccaatattataatccatggaattcacatacat
gattgtaagcaaggtgggaatactatggtgaggagctctccacagcattatgggtggagg
actatatcagatggtgatggagtatccatttttggggggagtcatatttgggtagaccat
tgttccttgtcaaattgcaaagatggtttgattgatgctattatggggtccactgcaatt
accatttctaacaattacatgactcaccatgataaagttatgctgttgggacacagtgat
tcccatgtccaagacaagaacatgcaagtaacagttgccttcaatcactttggagaaggc
cttgtccaaagaatgccaagatgtagacatggttatttccatgtggtgaacaatgactat
actcactgggaaatgtatgctattggtgggagtgctaatcccaccatcaatagccagggc
aacagattccttgctcctgatatcagatttagcaaagaggtgacgaagcacgaggatgca
ccagaaagcgagtggaagaaatggaattggagaacagatggggacctaatgttaaatggt
gcatatttcattcaatcaggagctgcagcctcttcaagctatgccaaggcttcaagcttg
agtgctaaaccttcctccttagtaacctccattgtttccggtgccggcgcccttacttgc
cggaaaggttcccgttgctga
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