Nicotiana sylvestris (wood tobacco): 104236107
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Entry
104236107 CDS
T05026
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104236107
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104236107
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GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104236107
NCBI-ProteinID:
XP_009788285
UniProt:
A0A1U7XP72
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Position
6:complement(93772792..93775051)
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AA seq
434 aa
AA seq
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MGTLKNRSIFFVSVTLVLSIEANISEFDEVWQTRATQAKKTAQDSYNPHPETVADNLNKH
VHTSEEGSNSTRRDLHKYNGPCMSTNPIDRCWRCDPNWAKTRMKLADCVLGFGHHTTGGK
GGKIYVVTDPSDDDMVNPKPGTLRHAVIQPEPLWIIFKHHMVIRLNQELIMTSNKTIDAR
GQQVHIAFGASFMLQFINNVIIHGLHIHDIKAGNGGLIRDSINHYGFRSRSDGDGISIFG
STNIWIDHVSMSNCDDGLIDAVQASTAITISNCHFTNHNDVMLFGASDSYSEDSILQITL
AFNHFGQGLIQRMPRVRWGFVHAVNNDYTHWLMYAIGGSQHPTILSQGNRFIAPPNPNAK
EVTKREYSPESVWKNWVWRSQGDLMMNGAFFVESGNPNHIFMKGPDMIHPRPGSYASRLT
RFSGSLNCIEGKPC
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgggaactctcaaaaataggtcgattttctttgtttcagtcactctagttttaagcata
gaggccaatattagtgagtttgatgaggtgtggcagactcgagctacgcaagcaaagaaa
actgctcaggattcctataatcctcatcctgaaaccgtcgcagacaatctcaacaaacat
gttcacacgtcggaagaaggtagcaatagcacaaggagagacttgcacaagtacaatggt
ccatgcatgtctactaaccctattgatcgttgctggagatgtgacccaaactgggctaaa
acccgcatgaagctagctgattgtgttcttggattcggccaccatacaactggtggcaaa
ggtggcaaaatctacgtagtaactgacccttcagacgacgatatggtgaatcctaagcca
ggaacactgcgccatgcagtcattcaaccagagccactttggatcatatttaaacatcac
atggtcattaggcttaaccaggaacttatcatgacaagcaacaagacaattgatgccaga
gggcaacaagtacacattgcctttggtgctagtttcatgttacagttcattaacaatgtg
attattcatggtcttcatatccatgatattaaggctggtaatggtggcctaatcagagac
tcgattaatcattatggttttcgatcaagaagtgatggtgatggtatttcaatctttgga
tccacaaatatttggattgatcatgtttccatgtctaattgtgatgatggactcattgat
gctgtccaggcttcaactgctattaccatttccaactgccatttcactaaccataatgat
gttatgttgtttggagcaagtgatagctactcggaggactcaattttacagataacactt
gcttttaatcactttggacaaggattgattcagaggatgccaagagtgagatggggattt
gttcatgcagtcaacaatgattacactcactggctaatgtatgcaattggtggaagccaa
caccccaccatcctcagccagggcaaccggttcatcgccccgcctaaccctaatgcaaag
gaggtgaccaaaagggagtattcacctgaaagtgtgtggaagaattgggtgtggagatca
cagggagatctgatgatgaacggagcgttctttgtggaatctggaaatcccaatcatata
ttcatgaagggtcctgatatgatccaccctaggccaggatcatatgcaagcaggctaaca
agattttcaggctctttgaactgcattgaggggaagccttgttag
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