Nicotiana sylvestris (wood tobacco): 104236241
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Entry
104236241 CDS
T05026
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104236241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104236241
04121 Ubiquitin system [BR:
nsy04121
]
104236241
03036 Chromosome and associated proteins [BR:
nsy03036
]
104236241
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104236241
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104236241
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104236241
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104236241
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104236241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
PHD_NSD
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
104236241
NCBI-ProteinID:
XP_009788438
UniProt:
A0A1U7XC39
LinkDB
All DBs
Position
9:97719290..97724657
Genome browser
AA seq
466 aa
AA seq
DB search
MRCIVGHEDIFHERDVKRQKKLSSGSSQMSLGSHGHIQLRCPSSEIVANSNCNMEYKNSE
SPSVGEPKSISDQHPLKGSVCGFCHSPKTTKGTGQFLYYANGKEVVENVTSPSKVICVHS
KCIEWTPRVFYDGDTIKNLKIELARAAKLRCSSCGMKGAALGCYVKSCRRSYHVPCAFEI
QDCRWDMDNYLMLCPIHKSTKFPTEKSNSRKHVRREVHQATSDIPPLTAEQLSFWARSSG
GPKEWVLCGSALSSEEKYVLVTFANMCGATVCKFWKPNVTHVVAATDEKGACTRTFKVLM
AILSGKWILTMDWVKACIAANGPIKEELYEISLDNHGCSGGPKAGRLRVSTNAPKLFDGF
KFYLSGDFVPTYKVDLLNLVEKAGGASIQSKEQLVEQTHAAQETHPPYLVVYNCDPPQGC
MFEEESVILKQRLAEAEDLAKQIGCQVIQHTWILECVAACKLVPFC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcatagttgggcatgaagatatatttcatgaaagggatgtgaagaggcaaaag
aaactaagttctggttcgtcccaaatgagcttaggaagtcatggtcatattcaactaaga
tgtcctagttctgaaattgttgctaactccaactgcaatatggagtataaaaatagtgaa
tctccttctgttggtgagccaaaatcaatttcagatcaacatcctctgaaaggaagtgtt
tgtggtttctgtcattcgcctaagaccacaaagggaactggacagttcttgtactatgct
aatggaaaggaagtggtggaaaatgtcacttctccgtccaaagtcatatgtgtgcacagt
aaatgcattgaatggacacctcgagtattttatgatggagatactataaagaatttgaaa
attgaactggcaagagctgcaaaactcagatgtagtagttgtggcatgaaaggtgcagca
cttggctgctacgtaaaatcttgccggaggagttatcacgttccctgtgcatttgaaatc
caggattgtcgatgggatatggacaactatctcatgttgtgcccaattcataaatctact
aaatttccaactgagaagtcaaattccaggaagcacgttaggagggaagtgcatcaagcg
acttcagatattcctcctctaaccgctgagcaattgagtttttgggcaagatcatcaggt
ggacccaaagaatgggttctttgtgggtctgctctatcctcggaagagaagtatgtgttg
gtgacatttgctaatatgtgtggtgcgactgtgtgcaagttttggaaaccaaatgtcaca
catgttgttgcagcaacagatgaaaagggtgcatgcactagaacatttaaagttctcatg
gcaattttgagtggaaaatggatcctaacgatggactgggtaaaagcttgtattgcagca
aatggtccaataaaggaggaactttatgaaataagtttagacaatcacggctgttctggg
ggccccaaagctggaaggctcagggtctcaactaatgctccaaagctttttgatggtttc
aagttttatttgagtggggattttgtgccaacttacaaagttgacctgttaaatctagtt
gagaaggctggaggcgctagcattcagagcaaggaacagttggtggaacagactcatgct
gcacaggaaactcacccaccttatctagttgtatacaactgtgatcccccacagggttgc
atgtttgaagaagaaagcgttattttgaagcaaagattagctgaagctgaggatctcgcc
aagcaaattggttgtcaggtcattcagcatacttggattctggagtgtgttgctgcatgt
aaactggtacctttttgctga
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