Nicotiana sylvestris (wood tobacco): 104236258
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Entry
104236258 CDS
T05026
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104236258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104236258
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104236258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
RBD_DGKtheta
Motif
Other DBs
NCBI-GeneID:
104236258
NCBI-ProteinID:
XP_070013706
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All DBs
Position
9:complement(97738459..97740891)
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AA seq
428 aa
AA seq
DB search
MESDEGKLFVGGLRWETTEEKLRDYFSNYGEIKHATIMRDRYTGLSRRFAFVVFSDPSVI
DTILQDKHNIDGRLRCNALVQKVTFMKESGRGREEIFSLFYLDCVEISRSFAVQVDTKRA
LPREQQQSLRSQLPYAGEDIETEPERNVRTRKIFVGGLPSSLTEEEFRQYFQNYGSVKDK
VIMYDPSTGRPRGFGFITFDTEDVVDKVLHKNFHELKNKLVEVKRALPKEANPAGNGGRG
GYLGYGSSGPIRFPQPTFVGYNPYNYGYGCEIYTCYGGAAGVYANPSLASIGYASSLPGV
TINQWSSQNHGYGLFYNLDASYGASSSWGASAYCAPFLPSTSNSQGHTSQNGNQGNGYST
YARNKGSFTDSDGNETGDRHTDNAPNSSTCEGSTEAGKHEANGHNTATICDSSNGSPGFP
NASWVSDK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagatgaagggaagctatttgtaggagggttaagatgggaaacaacggaggag
aagctaagagactattttagcaattatggagaaattaaacatgccacgatcatgcgtgat
agatacactggcttgtctagacgctttgcttttgttgtcttctctgatccttctgttatt
gataccattcttcaggacaaacacaacattgatggccgtttgcggtgcaatgcgttagta
cagaaggtcacatttatgaaggagagtgggagggggagggaagaaatattcagcttgttt
tatctggattgcgtggaaattagtagaagttttgctgttcaggtggacactaagagggct
ttaccaagagaacagcagcagagcttgagatcgcaacttccttatgctggtgaagatata
gaaacagaacctgaacggaatgtccgaactagaaaaatatttgtgggtgggctaccttct
tcccttactgaagaagagtttcggcagtacttccaaaattacggtagtgtgaaagataaa
gtaataatgtatgacccaagcactggtcgccctcgaggatttggttttatcacctttgac
acagaagatgttgttgacaaagttcttcataaaaattttcatgaactgaaaaataagcta
gtggaggtaaaacgcgccctgcctaaagaagcaaatcctgctggcaatggtggtcgtgga
ggttacttgggttatggttcttctggtcccattaggtttccgcagcctacttttgttggt
tacaatccctataattatggctatggttgtgagatttatacttgctacggtggggcagct
ggagtatatgcgaatccatctttggccagcattggttatgctagcagcttgcccggtgtc
acaataaaccagtggagcagccagaatcatgggtatggtcttttctataatttagatgca
agttatggggcttctagttcgtggggtgcttcagcctactgcgctccttttttgccatca
actagtaattctcagggtcatacttctcaaaatgggaatcaggggaatggttacagcacc
tacgctagaaataaaggctctttcactgattctgatggtaatgagactggtgataggcat
acagataatgctccaaacagcagtacctgtgaggggtcaactgaggcagggaaacacgag
gcaaatgggcacaacacagcaacaatctgtgacagcagtaatggttctccggggtttcca
aatgcatcttgggtttcagataaataa
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