Nicotiana sylvestris (wood tobacco): 104236575
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Entry
104236575 CDS
T05026
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104236575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsy03032
]
104236575
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104236575
DNA replication proteins [BR:
nsy03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104236575
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104236575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
ECT2_BRCT0
TopBP1_BRCT0
Motif
Other DBs
NCBI-GeneID:
104236575
NCBI-ProteinID:
XP_009788827
UniProt:
A0A1U7X9P0
LinkDB
All DBs
Position
9:complement(106152482..106166790)
Genome browser
AA seq
995 aa
AA seq
DB search
MMTTKVFNGASVFMSRNLVPPEQFDALHDALKHNGAQVFLCCDPSRNSSTDYHVISSPHH
EKFGDLQAKGCNLIGPQCVLSCAKEQRPLPQQGFTCCLAMDGVKILASGFEMDEKVELGK
LVSAMGGVLHTKASLDVSFVIVKNVLAAKYKWAVNKLKKPIVTINWLQQCWKEHRLVPQE
SFKVLPFSGLTICVTRIPIDERREMEKIILQNGGKYSPELTRKCSHLICNAPEGEKYKVA
KRWGHIHTVTKRWFDQSVARRACLDEESYPVQAGSPNTMTTLRMTNQHSLEKGMRNLQGL
SSLATPSNAEPVLCSGASDSYVEATLSQDMPDTPVLTKKEVNLAPAENPKSDYSAPVSTK
NEQSGAPIEQEQNDCDGGVADDTQADDNDFYLADCRILIVGFNASEMRKLVNLVRKGGGS
RYMSFGEKLTHIIAGNPSEKLLSCSEIKELRNLAALGVVHVVKSEWLQDCDREKKEVPVL
RKHIAYDLLLPKDPIHCSNGAGTSTSMKRQGKSYGHTISSDEHAWRGTDSGCAMPSDKNK
ELENMNDIRTSLRENGVQHQPYSSHHKDEKLLNESGCAVNGRKPSSVFEGRRFCFSASFP
VDRRAEIVEWVSQGGGVVVEDQTETNVHFTVECHGTLCSEKDGAAATFVSSHWIKSCLED
GCLLDVGSHILYSPLPCRVPFPAFQSFRFCVSQYDEKERQLLRNLCFTIGAKFAEKLTKR
VTHLLCKFISGPKYEVACKWGIQPVTCEWIYECIKLNKIVSPDPFYPKEVTSEDREAGVC
TTSQFPTQAVRMTSGDTSSQPQSQPQELINLRTEAFAGRSIAKEEMKHSSRWNKKARLMV
VEETNCSLTCVSNENNAFCGTNPPEKNMIGSTKEGSSAVPDVAAAIEDLLEQTSKIHDQK
SPSRIECDKELFTSGCNILAQGHEDHHTTLGLSNDWTNRFEKKDDSHGHSGDATANVYDH
FSETQTDSQVVGYAEDLSGRQMIIDRVRTRSSGLT
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacgaaggtgttcaatggagcgagtgtgttcatgtcgcggaatctcgtcccg
ccggagcaattcgacgcgcttcacgacgcgctcaagcacaacggagctcaagtctttctc
tgttgcgacccctcccgaaattcttccactgattaccacgtcatttcttctccgcatcat
gagaagtttggggatcttcaagctaagggctgcaacttgataggtcctcagtgcgtgctt
tcttgtgctaaagaacagaggccactacctcagcaggggtttacttgttgccttgcaatg
gatggggtcaagatcctggcatctggttttgagatggatgaaaaggttgaacttggaaag
ttggtgagtgctatgggaggggtcctgcatactaaagcttcattggatgtgagctttgtt
attgtgaagaatgttttggctgcaaagtacaagtgggctgtaaacaaactaaagaaacca
attgtcactattaattggcttcagcaatgctggaaagaacaccgtcttgttcctcaggag
tcattcaaagtccttcctttttctgggttgacaatttgtgtcaccagaattcctatagat
gagcggagggagatggaaaagattatcttgcaaaatggcggaaaatactctcctgagctg
accagaaagtgctcacatttaatttgcaatgctccagaaggtgagaaatacaaggttgcc
aaaagatggggtcacatacatactgttactaagaggtggtttgaccaatctgttgcaaga
agagcatgtcttgatgaggaatcatatcctgttcaggctggttctccaaatactatgacc
accttaagaatgacaaatcaacatagcctggaaaagggcatgagaaacctacaagggttg
tcctccttggctacgccatcaaatgcagaacctgttttgtgcagtggagcgtctgattca
tatgtggaagctaccctctcacaagatatgcctgatactcctgtgcttacaaagaaggag
gtgaatttagcacctgctgagaacccaaaaagtgattacagtgctcctgtctctacaaag
aatgagcagagtggagcacctatagagcaggaacagaatgactgtgatggtggtgttgct
gatgacactcaagcagacgacaatgatttttatttggcagattgcagaatactaatcgtt
ggttttaatgcatctgaaatgcgaaaacttgtcaaccttgtccgaaaaggtggtggctct
cgttacatgtcttttggtgaaaagttgacacacataatagctggaaatccatcagagaaa
ctattatcttgcagtgaaatcaaagaattaagaaatcttgcggctttgggtgtcgttcat
gtggtaaaatcagaatggctgcaggattgtgaccgtgagaagaaagaagttcctgttcta
aggaagcatattgcttatgatttacttcttccgaaagatcctattcactgtagtaacgga
gctggaaccagcacgagtatgaaaagacaaggaaaatcctatgggcatactatatcttca
gatgaacatgcatggagaggcacagattctggatgtgcaatgccatcagacaaaaacaaa
gaactagaaaatatgaatgacattagaacttctttgagagagaatggggttcaacatcag
ccatattcttctcatcacaaagatgagaagctactgaatgaatctggttgtgctgttaat
ggtagaaagccatctagtgtgttcgagggaaggcggttttgcttttcagcttcatttccc
gttgatcggagagctgaaattgttgagtgggttagtcaagggggaggagtggtggtggaa
gatcaaactgaaacaaatgtgcatttcactgtcgagtgtcatggtacgttgtgctccgag
aaagatggtgctgcggctacttttgtatcaagtcactggattaagtcttgtctggaggat
ggatgcttgctggatgttggtagtcacatcctctattctccacttccatgccgagttcct
ttccctgcattccagagttttcgcttctgtgtttcgcagtatgatgagaaagaaagacag
ttgctgagaaatttgtgttttacaattggagccaaatttgctgagaaattgactaaaagg
gtcacacatttgttgtgtaaatttatcagtggccctaaatatgaggttgcatgtaagtgg
ggaatacaaccagtcacttgtgagtggatttatgagtgtatcaagctgaacaaaattgtt
tctccagatccattttatcctaaggaagtcacttctgaagatcgagaagctggggtatgc
acaacaagccagtttcccacacaagctgttaggatgacatctggtgatacctcttcccag
cctcaaagccagccccaagaactcataaatctgagaactgaagcttttgctggtagaagt
attgcaaaggaagaaatgaagcattcaagtagatggaataagaaggcaaggctcatggtg
gttgaagaaaccaattgttcattgacctgcgtatcaaatgaaaataatgcattctgcggg
acaaatcccccagaaaagaacatgataggaagtactaaagaaggttcttctgcagttcct
gatgtagctgctgctatagaggatttattggagcaaacaagcaagatccacgatcaaaag
tctccatcaagaatcgagtgtgataaagaactttttacatctggttgtaacattcttgct
caaggtcatgaagatcatcatactactcttggattgtctaacgactggacgaacaggttt
gagaaaaaagatgattcccacggtcattccggagatgcaactgcaaatgtgtatgatcac
tttagtgaaacacagacagactctcaggttgttggatatgcagaagacttgtctggcaga
caaatgattatcgatagagtacgaacaaggagttctggcttgacttga
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