Nicotiana sylvestris (wood tobacco): 104236647
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Entry
104236647 CDS
T05026
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104236647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104236647
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104236647
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Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
104236647
NCBI-ProteinID:
XP_009788922
UniProt:
A0A1U7X9Z3
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Position
9:complement(73378698..73383275)
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AA seq
581 aa
AA seq
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MAYSFPEEVLEHVFSFLSSDQDRNSVSLVCKSWYEIERWCRRRIFVGNCYAVSPSLMIRR
FPEVRSVELKGKPHFADFNLVPEGWGAYVHPWIVAMSRSYPWLEEIRLKRMVITDESLEL
ISKSFKNFKVLVLSSCDGFTTDGLASIAANCRNIRELDLGESEVEDLSGHWLSHFPDSCT
SLVSLNIACLASEISFLALERLVARSPNLRTLRINRAVPLEKLPNLLRHASQLIEFGTGA
YSADVRSDVFSNLTEAFSGCKQLKGLSGFWDVVPAYLPAIYPVCSRLTSLNLSYATSQNP
DLGKLISQCHNLQRLWVLDYIEDIGLEELAANCKDLQELRVFPSDPFAPEPNATLTEQGL
VAVSDGCPKLQSVLYFCRQMTNAALVTIARNRPNMIRFRLCIIEPRSPDYLTLGPLDTGF
GAIVENCKELRRLSLSGLLTDRVFEYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCESLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLAQKIPRLNVEVIDERGPP
DTRPESCPVEKLYIYRTVAGPRFDTPGFVWRMDEDTAVRLS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcattcccggaagaagttttagaacacgtgttctccttcctcagctccgac
caggaccggaactccgtatccttagtctgcaaatcatggtacgagatcgaacgctggtgt
cggaggagaatcttcgtcggaaactgctacgccgtgagccctagcctcatgatccgacgg
ttcccagaagtcagatctgtagagttaaaaggaaaacctcattttgctgacttcaatctg
gtccctgaaggttggggtgcttacgtgcacccttggattgtggctatgtctaggtcttac
ccttggcttgaggaaattaggcttaagcgtatggtaattacggatgagtccttggagttg
atttctaagtcgtttaagaacttcaaggtgctagttttgtcttcttgcgatggttttact
actgatggtcttgcttctattgccgctaattgcaggaatattagagaactggacttggga
gagagtgaagtggaggaccttagtggacattggcttagccattttcctgatagctgcaca
tcacttgtttcacttaacattgcctgtttggcttctgagatcagtttcttagctttggag
cgtttggttgcccgctctcctaatttgaggactcttcggataaatcgtgctgtacccctt
gagaagcttccgaatctgcttcgccacgcttctcagttgattgaatttggtacaggcgcc
tactccgctgatgtacggtctgatgtcttctcaaacctgacagaagctttttcaggctgc
aagcaacttaaaggcttgtctgggttttgggatgttgttccggcttaccttccagctata
tatcctgtttgctccagactcacctctttaaatttgagctatgctaccagtcaaaacccc
gaccttggcaagctcataagtcagtgtcacaacttgcagcggttgtgggtgctagactac
attgaagatattggtcttgaggaacttgctgccaattgtaaggaccttcaagagctgagg
gtgtttccttctgatccttttgctcctgaaccaaatgcaaccttgacggagcaaggcctt
gtagctgtctcagatggctgcccaaagctccagtctgttttatacttctgccgtcaaatg
acaaatgcagctttagttactattgctaggaatcgtcctaacatgattcgttttcgcttg
tgtattattgagcctcgaagtcccgattacttaactcttgggccgcttgatactggtttt
ggggccattgtggagaactgtaaagaattgcggcgactttcactttctggcctccttact
gatcgtgtctttgagtacatagggacccatgctaaaaagttagagatgctttccatagct
tttgctggggacagcgatttgggactccaccatgtactctctggctgtgaaagcctccgg
aagttggagatcagagattgtccctttggagacaaggctctcttggccaatgctgcaaag
cttgagacaatgcgatccctttggatgtcttcttgttcagtaagttttggagcatgtaag
ctgctagctcaaaagattcctaggcttaatgttgaagtcatagatgagaggggtcctcca
gatacaaggccagaaagctgccctgtagaaaaactttacatatatcgaacagtggctgga
ccgaggtttgacacgcctggttttgtttggagaatggatgaagatacagcagtgagattg
tcttga
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