Nicotiana sylvestris (wood tobacco): 104236784
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Entry
104236784 CDS
T05026
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104236784
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104236784
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
104236784
NCBI-ProteinID:
XP_009789094
UniProt:
A0A1U7XQ93
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Position
4:7440972..7451149
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AA seq
685 aa
AA seq
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MKKVGRNREWSSVVGLLGILLQLFLLIECAATRRITQKNSQSDLQSLYPPVQLHKLNNHV
LVDNGLFNITFSVPGGMVIAIQYNGIDNLLENENKLNNRGYWDIVWNKAEKPGIIYDKLE
GTNFEVILQDENQVELSFTRTWKSLNSSSLSMNVDKRFIILRGISGFYSYAILERLEGWP
DIDVYQGRMAFKLNAKLFPYMAISDERQRIMPTAKDREMGRELDYPEAVLLTSPTNSFLK
GEVDDKYQYSLEDKDNRVHGWISPNPRNGFWMITPSNEFRTGGPVKQDLTSHTGPITLSM
FFSTHYGGDILALRFRNGEPWKKVFGPVFIYLNSVSSDDEDILTLWTDAKEQMLIETENW
PYDFPLSQDFVQADQRGTVSGRLLVSDSYVSKRLITANSAFIGLAAPGDVGSWQTENKGY
QFWTQTDNEGYFLIKSIIPGNYSLYAWVPGFIGDYKYKNYINITPGSRTRLQTLMYNPPR
NGPTLWEIGIPDRTAAEFFIPNPQPKLQNQLYIEHYSEKFRQYGLWDRYTELYPNDDLIY
TVGSSNYQTDWFFAHVNRYTFNDEGNKTYIPTTWQIAFDLQEVEKSSNYTLQLALASTNE
AELQIRVNDQDADHVPNFTTGLIGKDNAIARHGIHGLYWLYSIDVPGSVFATGKNVIFLK
QSRGSSPWSGLMYDYIRLEGPPAND
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagttgggagaaatagagaatggagttctgttgttggattgttgggtattttg
cttcagctattcttgctaattgaatgtgcagcaacaaggagaattacccagaagaacagc
caatcggacttgcaatccttatatcctccagtacaattacataaactgaataatcatgtg
ttggtggataatggcctgttcaacattacattttctgttcctgggggaatggtcattgct
atacaatacaatggcatcgataatttattggaaaacgaaaataaactaaataatagaggg
tattgggatattgtttggaacaaagcagaaaaaccagggatcatctatgacaaactagaa
gggacaaactttgaggttatactgcaagatgaaaatcaagtagagctttcattcacaagg
acttggaagtcattaaattcctcaagtctttctatgaatgttgacaaaaggtttataatt
ctccgggggattagtggcttttactcctacgcaattttggagcgcttggaaggttggcca
gacatagatgtctaccaaggaagaatggctttcaagcttaatgcaaaattgttcccatat
atggctatttcagatgaaaggcagaggataatgcccacagctaaagatcgagaaatgggc
cgagaacttgattacccagaagcagtacttcttacaagcccaactaattctttcctcaaa
ggagaggtggatgataagtatcaatactctcttgaagacaaggataatcgggtccatggg
tggataagcccaaatccaagaaatggattttggatgattacacctagtaatgagttcaga
acaggtgggcctgttaaacaagacctcacctctcacaccggcccaataactttatctatg
tttttcagcacacattatggtggagatattctagcattaagatttcgaaatggagagccc
tggaaaaaggtttttggtcctgtttttatctacctaaactctgtttcatctgatgatgaa
gatattctcacactatggacagatgcaaaggaacagatgttaatagaaaccgaaaattgg
ccatacgatttccctctgtcgcaagattttgttcaagctgatcaacggggtactgtaagt
ggcagattactcgttagcgacagctatgtaagtaaaagacttatcactgcaaattctgct
ttcattgggttggctgcacctggagatgtagggtcatggcaaactgaaaataagggttat
caattttggactcaaacagataatgagggatattttttaattaaaagtatcatcccaggc
aattatagcttatatgcttgggttcctggatttattggcgattacaaatacaagaactac
atcaacattaccccaggatcaagaactaggctgcaaaccctaatgtataaccctccaagg
aatggaccaacattatgggaaataggtattccagatagaactgcagcagaattcttcatt
ccaaatccacaaccaaaactccaaaaccagttgtacatcgaacattactcagaaaagttt
aggcaatatggattatgggatcgttacacagaactataccctaatgatgatttaatctac
actgttggatcaagcaactatcaaacagattggttctttgctcatgtaaatagatatact
ttcaatgatgaagggaataaaacatatataccaacaacatggcaaattgcgtttgatctt
caagaagtggagaagtcctcaaattatacacttcagctagcattggcttcaacaaatgaa
gctgaattgcaaattcgagtaaacgatcaagatgcagatcatgttcctaacttcacaaca
gggttgataggcaaggataacgcgattgcaagacatggaattcatggcttgtattggttg
tatagtatagatgtccctggatctgtttttgctactggaaaaaatgttatatttctaaag
caaagtagaggttcaagcccctggagtggactaatgtatgattatattcgtcttgaaggc
cctcctgcaaatgattaa
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