Nicotiana sylvestris (wood tobacco): 104236785
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Entry
104236785 CDS
T05026
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104236785
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104236785
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
104236785
NCBI-ProteinID:
XP_009789095
UniProt:
A0A1U7XRJ2
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Position
4:7453559..7461731
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AA seq
670 aa
AA seq
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MIGEMVGKRLQRQTLLWFTIIIQLFSIFTSSRMLHARHTPENGPPVKLHISHHHVIIDNG
IVQLTLSNPTGHIAGVSYKGIDNLMEKRFPESRRGYWDTMWKLPEDKASTFDTFFATNFR
VIAKDNNKVEVSFTKTWNPNADHDLPLNIDKRFVMLRGSSGFYSYGIFERPEGMPELRLD
EARIAMKLRQNLFLYMAVSDDRQRVMPTDQDRSSGKVLGFREAVRITHPSNPKLKNEVDD
KYQYSSDDNDIKVHGWICNRPHVGFWVITPTNEYRSGGPMKQDLTSHAGATSLATFFSGH
YAGPELGVSLKEGEPWKKVFGPVFFYLNSDSGNNHSTLWEDAKRQMFEETAKWPYDFPES
KDYPKANERGTISGRLLVDDRYISNDPIFAKSAYIGLALPGDTGSWQTDTKGYQFWTQAD
ETGYFKITGIIPGTYNLYSWVPGVIGDYKYNQTLAITQGSEINLGHLIYNPPRNGPTLWE
IGIPDRTAAEFFVPDPLPGFTNRVLSNSTQKFRQYGLWDRYTDLYPDEDLIYKVGVSDYT
KDWFYAHVTRRTENKKYIPTTWQISFELPTVDPSGTYTLHVALASATYSHLQGRINNPDR
PRPNFETPGIGRSNAIARHGIHGLYSLFSFQIPEYELQNGQNIIYLKQVKGGSPFNGVMY
DYIRLEGPPQ
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgataggagagatggttggaaagaggctacaacgacaaacattattatggtttacaatt
attatccagcttttctcgattttcactagttcgaggatgctgcatgctaggcatactcca
gagaacggtcctccagtcaaattgcacatctcacatcaccatgtgataatagataatggc
atcgttcaacttaccctatcaaatccaacgggacacattgctggggtaagttacaaaggc
attgataatctcatggagaaaagatttccagaatcaaggagaggatactgggataccatg
tggaaacttccagaagacaaggctagcacttttgatacgttttttgcaacaaatttccga
gttatagcaaaagataataataaagtcgaagtttcttttacaaaaacttggaatcccaat
gctgaccatgatcttcctctaaacatcgacaaaaggtttgtgatgctgcgaggaagttct
ggattctattcatatggaatatttgaacgtccagaaggaatgccagaacttaggctagat
gaagccaggattgcaatgaaactcagacagaatttgttcctttatatggctgtatcagac
gataggcaaagggtaatgccaacagatcaagatcgttcatctggcaaagtccttggcttc
agagaagctgttagaataacacatccatccaaccctaaactcaagaatgaggttgatgat
aagtaccaatattcgtccgatgataacgatatcaaggtacatggatggatttgcaatcgt
cctcatgtagggttttgggtgattacaccaaccaatgaatatcgtagtggtggaccaatg
aagcaagatcttacttctcatgccggtgcaacatccttagcgacatttttcagtggacat
tatgcaggtccagaattaggagtcagtctcaaagaaggagagccatggaaaaaagtattt
ggtcctgttttcttttatctcaactcagattctggtaacaaccatagcacactttgggag
gatgctaaaagacagatgtttgaagaaactgcaaaatggccatatgatttcccagaatca
aaagactatcccaaagccaatgaacggggcacaattagtgggcgattattggtcgatgac
aggtacataagcaatgatcctatttttgcaaaatctgcatatattggattggctctccct
ggagatactggatcatggcaaacagataccaagggttatcaattttggactcaagcagat
gagaccggatattttaagattactggaattatacccggaacttataatttgtactcatgg
gtccctggagttattggagattacaaatacaaccaaactttggccattacccaaggaagt
gaaattaatctaggtcatttaatttataaccctccaagaaatggtccaactctatgggaa
ataggcattcctgatagaactgctgctgaattctttgtccctgatccattgcctggcttc
actaaccgcgtcctcagcaacagtacacaaaagtttagacaatatggtttatgggatcgt
tatacagatttatatcctgacgaagatttaatatacaaagttggtgttagtgattacaca
aaggattggttctacgctcatgtaaccaggagaactgaaaacaagaaatatataccaaca
acatggcaaatatcatttgaacttccaactgtggatccaagtggaacttacacactccat
gtggcattggcttctgccacgtactcccatttgcagggaagaataaacaaccctgataga
ccaaggccaaattttgaaaccccaggaattgggaggagtaatgcaatagcaagacatgga
attcatggattatacagtcttttcagttttcaaattccagaatatgaattacaaaatgga
caaaatatcatatatttaaagcaagttaaaggtggtagtccttttaatggagtcatgtat
gattatattcgacttgaaggccctccacagtaa
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