Nicotiana sylvestris (wood tobacco): 104236918
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Entry
104236918 CDS
T05026
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03030
DNA replication
nsy03410
Base excision repair
nsy03420
Nucleotide excision repair
nsy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104236918
03410 Base excision repair
104236918
03420 Nucleotide excision repair
104236918
03430 Mismatch repair
104236918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsy03032
]
104236918
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104236918
DNA replication proteins [BR:
nsy03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104236918
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104236918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
PTCB-BRCT
RCF1-5-like_lid
AAA_30
AAA_22
BRCT_2
AAA_19
AAA_5
RuvB_N
AAA_assoc_2
AAA_18
AAA_14
nSTAND3
AAA_16
DNAX_ATPase_lid
NTPase_1
Gp44_lid
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
104236918
NCBI-ProteinID:
XP_009789266
UniProt:
A0A1U7XHY1
LinkDB
All DBs
Position
11:complement(6025961..6041718)
Genome browser
AA seq
998 aa
AA seq
DB search
MSDIRKWFMKQHDKGTGNGSMSKNSAPEKPSAEKSPPGNLVQEGQETAGRRKTSKYFATN
KVKAKEEKVEEVSAKRKAQNAGGSSSVNEKPPAAKRIHKAEDDDDFVLPASAMGSRGATP
AKKSASGSGRGSARKYVISDESDDDLKDTKSDPKPTGRGRGGRAAQTGGKGIPLDESDDD
ASADKDTKSGGRGRGGKGPSAAPSGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPN
CLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIEGRKSSKAKEL
GTAFLTEDGLFDMIRSSKKSKSATQPESKKSVATVVSPAKRNSQNTSDGTGSTATKILAA
KELTPSASPAKRKGQAKESSLPWTEKYRPKAIVDIIGNKSLVEQIQRWLESWDEHFLNAA
SKGKGKKQNDSGAKKAVLLSGMPGIGKTTSAKVVSQLLGFQTIEVNASDSRGKADSKIEK
GIGGSTANSIKELVSNESLGANIGRLHHQKTVLIMDEVDGMSAGDRGGVADLIASIKLSK
IPIICICNDRYSQKLKSLVNYCLPIVFRKPTKQQMAKRLKQVANAEGLQVNEIALEELAE
RVGGDMRMALNQLQYMSLSKSVIQYDDIRQRLLSSSKDEDISPFKAVELLFDFNAKNLKI
DRRIDLSMSDPDLVPLLIQENYLNYKPSSVGKDDDGLKRMSLIAHAADSIANGDLINVQI
RRYQQWQLSPAGCLSSCIIPASLLHGQRQTLEQGERNFNRFGGWLGKNSTMGKNYRILED
LHVHLLASRESYLGRANLRLDYFTLLTKKLTDPLKLLPKDEAVENVVDFMDSYSISQDDF
DNIVEISKFKGHPNPLDGIQPVVKAALTRAYNKGSKSRVIRTADLISLPGIKKAPKKRVA
AMLEPLDEGLAEENGEAIAEDEENSSEPEDIDVEKKLESDLQSLNSKGIQVNVDLKGAGG
KKPSAGRGRGSSSSREKGGAESSSKRGGRGSGATKRKR
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatatcagaaaatggttcatgaagcagcatgacaaaggtacgggtaatgggagt
atgtccaagaatagtgctccagaaaagccttcagcagaaaagtctcctccaggaaacctg
gtacaagaaggacaagagactgccggcagaaggaaaactagtaaatattttgctacaaac
aaggtgaaggcaaaagaagaaaaagtagaggaagtatcagcaaaaagaaaagctcaaaat
gctggtggaagttcatcagttaatgagaagccaccagctgcgaaaagaattcacaaagct
gaggatgacgatgactttgtactgcctgcatctgcaatgggatccagaggtgccactcct
gccaaaaagtcggcaagtggctctggaaggggatctgcacggaagtatgtgatcagtgat
gaaagtgacgatgatcttaaggatacaaaatctgatcccaaacctactggaagagggcgt
ggtggacgagcagctcagactggtggaaaaggcatccctcttgatgaaagtgatgatgat
gcctcagctgataaggacaccaaatctggtggacgagggcgtggtggtaaaggaccatct
gcagcaccaagtggtggacgaggcagaggtggtggaggacggggcggtttcatgaatttt
ggcgaaagaaaagaccctcctcacaagggggaaaaggaagttcctgaaggtgccccaaac
tgtttagctggtttgacttttgtaattagtggaactctggacagtttagaaagagaagaa
gctgaggatttgattaaacgccatggtggtcgtgttacaggatctgttagcaagaaaacg
aattatcttttatgcgatgaagacatcgagggacggaaatcctctaaagccaaggaactc
ggaactgcatttctcactgaggatggtttgttcgatatgatccggtcatcaaagaaatca
aaatcagctacacagcccgagtcaaagaaatcagtggccactgttgtttctcctgcaaag
agaaattcacaaaatacaagtgatggaactggaagcactgccacaaagattttagctgcc
aaagaattgacacctagtgcatctcctgccaagaggaaaggccaagctaaagagtcttca
ctaccatggacagaaaaatacaggcccaaagctattgtagacataatagggaataagtca
ctggtagaacagattcagcgttggctggagagctgggatgagcattttctaaatgcagct
agtaaggggaaggggaaaaaacagaatgactctggtgctaaaaaggcagttctgttgagt
ggtatgccgggtatagggaagactacatcagcaaaggtggttagtcagctactgggtttc
caaaccatcgaggtaaatgctagtgatagtcgtggaaaggctgattcaaaaattgagaaa
ggaattggtggtagtactgcaaattccataaaagaacttgttagcaatgaatccctaggt
gctaatattggcagattgcaccatcagaagactgttctgattatggatgaggttgatggc
atgtctgctggagatagaggtggtgttgccgatcttattgctagcatcaagttatccaaa
attcctattatctgcatttgtaatgatcgctacagtcagaaattgaagagccttgtcaat
tattgcttaccaattgtcttccgaaaaccgaccaagcagcagatggcaaaaaggttaaag
caagtggcaaatgctgaaggccttcaagtcaatgagattgctcttgaggaattggcagaa
cgtgttggtggcgatatgcgtatggctctaaatcaattgcaatacatgagtctctctaag
tctgtgatccaatacgatgatataagacagcgccttctaagcagttcaaaggatgaagac
atctcacccttcaaagctgtcgaactgttgtttgattttaatgccaagaacttgaaaata
gatcgaagaattgatctaagtatgagtgacccagatcttgtcccgcttcttatacaggag
aactatctcaattacaagccaagttctgttggcaaagatgatgatggtttaaagcggatg
agcctaattgcacatgctgctgactctattgcaaatggtgatttaataaatgtacagatt
cgtagataccagcagtggcaactatctccagctggttgcctttcgtcttgcattattcct
gcttcgttgttgcatggacagaggcagactcttgagcagggagaacgcaactttaatagg
tttggtggctggctaggaaagaactctacaatgggaaagaattaccggattttggaggac
ttgcatgttcacctactcgcttctcgtgaatcatatttgggaagggcaaacctgagactt
gactactttactcttcttacaaagaagttgacagatccattaaaactgctacctaaggat
gaagctgtcgagaacgttgtggatttcatggattcgtactctataagccaggatgacttc
gataatattgtggagatatcaaaattcaagggacatccgaatccactggatggtattcag
cctgttgtgaaagctgcactgacaagggcatacaacaaaggaagcaaatcacgtgttatt
cgcacagcagatttaatatcccttcctggaattaaaaaagctcccaagaagcgggttgca
gcgatgctggagccactagatgaaggcttagctgaagaaaatggtgaagcaattgctgaa
gatgaagagaactcatcagagccagaggatatagatgttgagaaaaagttggagtcagat
cttcagagtctcaattctaagggaatccaagtaaatgtagatctgaagggtgctggtgga
aagaagccgtctgctggaagaggaagaggaagttctagtagcagggagaaaggaggtgct
gaatcctcgagcaagagaggtggccggggttctggagctaccaagagaaagaggtga
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