Nicotiana sylvestris (wood tobacco): 104237380
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Entry
104237380 CDS
T05026
Name
(RefSeq) uncharacterized protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104237380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104237380
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104237380
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
FANCI_S4
Motif
Other DBs
NCBI-GeneID:
104237380
NCBI-ProteinID:
XP_009789829
UniProt:
A0A1U7XSG0
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Position
5:25587422..25591335
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AA seq
195 aa
AA seq
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MGNHQETRRELIKAKIPFYFYPFLKTNGKNGNDKPLEFIRLTSLGVIGSLTKFDDPYGGE
ILYFFLETELVPLCLHCMDLGDELSRKVATLIVMKILMQEEGLSYCCALAERFYSIVQVL
HRVVQKLSQKPCILLLRYVIQSYLCLSQVSRFVGPSDAFRSQIPCQLFDNTFMDMLRDDP
ETSTMLQQLYVHIMR
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcaccaagaaacaagaagggagctcataaaagctaaaataccattttatttt
tacccatttctcaagaccaatggaaaaaatggaaatgacaagcctttggagtttatcagg
ctcaccagcttgggtgttatcggttccctaacaaagtttgatgatccatacggtggtgag
atcctttattttttcctggaaacagaactggttcctttgtgcctgcattgcatggatcta
ggtgatgaattgtcgcgtaaggttgcaacactcatagttatgaagattttgatgcaagag
gaaggactaagctattgctgtgcgttagctgaacggttttactcaatagtacaggtcttg
catcgagtagtacagaaactttctcaaaaaccctgtatactgctgctaagatatgtgata
caatcttatctgtgtctttcacaagtatcaaggttcgtcgggccatctgatgcattcaga
agccaaattccttgtcagctatttgacaacacctttatggacatgcttcgtgatgacccc
gaaacttcaacgatgttgcagcagctatatgtccatataatgcgctga
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