Nicotiana sylvestris (wood tobacco): 104237457
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Entry
104237457 CDS
T05026
Name
(RefSeq) uncharacterized protein
KO
K12816
pre-mRNA-processing factor 17
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104237457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsy03041
]
104237457
Spliceosome [BR:
nsy03041
]
Complex C
Other components
Step II factors
104237457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
WD_LRWD1
Beta-prop_NWD2_C
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
104237457
NCBI-ProteinID:
XP_009789914
UniProt:
A0A1U7XSP7
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Position
2:28626558..28630627
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AA seq
587 aa
AA seq
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MDLLQSYADDETAESPPQNPNSQTSDQSPSPDSSPIRMLPSKSAAPKVDDTMLTLTVAGE
AARAQSKPLDPTQHLVGFNPTYEQLWAPIYGPAHPYAKDGLAQGLRNHKLGFVENAAIEP
FVFDEQYNTFQKYGYAVDPSENSYIGDLDKMKECDAISVYNIPQHEQKKRKLEKKKEKME
EEGDEGDVDMSEVENPATDTWLMKNRKSPWAGKKEGLQVELTEEQKKYAEEYAKKKGEER
GGGEKPEPLLEKSTFHGKEEKDYQGRSWIAPPKDAKAANDHCFIPKRLVHTWSGHTKGVS
AIRFFPKHGHLILSAGMDTKVKIWDVYNSGKCMRTYMGHSKAVRDIWFCNDGSKFLTAGY
DKYIKYWDTETGQVIQTFTTGKIPYVVRLNPDEDKQNVLLAGMSDKKIVQWDINSGQITQ
EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISPHPN
GNWIAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVLSGDGEGRC
WFWDWKSCKVFRTLKCHDGVCIGAEWHPLEQSKVATCGWDGLIKYWD
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggatctcttacagtcctacgccgacgatgaaaccgccgaatcgccgccacaaaaccct
aactcccaaacttccgaccaaagcccttcgccggattcatccccaatccgcatgctccct
tcaaaatccgccgcccccaaagtcgacgacacgatgctaaccctaacagtcgccggcgaa
gctgccagagctcaatccaaacccctcgatccgacccagcacctcgtcggtttcaacccg
acatacgagcaactctgggcaccaatctacgggccagctcacccctacgccaaggacggg
ttagctcaagggctccgaaatcacaagctagggtttgttgaaaacgccgctattgaacct
tttgtattcgacgagcagtacaacacttttcagaaatacgggtacgctgttgatccctct
gaaaatagttacattggtgacttggataaaatgaaggaatgtgatgcaatttctgtgtat
aatatacctcagcatgaacaaaaaaagaggaaattagagaaaaagaaggaaaaaatggag
gaggagggtgatgagggtgacgtggacatgtcggaagttgagaatccggcgacggacacg
tggctgatgaagaacaggaagagcccatgggctggaaagaaagaagggttacaagtagaa
ttaactgaggagcagaaaaagtatgctgaagagtatgctaagaagaagggtgaagaaaga
ggtggtggagaaaagcctgagcctttacttgaaaagagtacattccatggtaaagaggaa
aaagattatcagggtaggtcgtggatcgctccacctaaggatgcaaaggctgcgaatgat
cattgttttataccaaaaagattggttcatacttggagtgggcacaccaaaggggtttcg
gctattaggtttttccctaagcatggtcatttgattttgtcagctgggatggatacaaag
gtgaagatttgggatgtttacaattctggtaaatgtatgaggacttatatgggacattcg
aaggcggtgagggatatttggttttgcaatgatgggtcgaagtttttgacagctgggtat
gataagtacattaagtattgggatacagaaacaggacaggtgatccaaacgttcaccaca
gggaagataccctatgttgtgaggcttaaccctgatgaggataagcagaatgtacttttg
gctggtatgagtgataagaagattgtgcagtgggatataaatagtggacagattacacaa
gagtatgatcaacatctgggggcagttaatacaattacctttgtggataataataggagg
tttgtgacctctagcgatgataaatcactacgtgtttgggaatatggtattcccgttgtt
attaagtatattagtgaaccccatatgcattccatgccatctatttcgccccatccgaat
gggaattggattgcagctcagagtttggataaccagattcttatttatagtacacgagag
agatttcagctgaataaaaagaaaagatttgctggacacattgtcgctggttatgcttgc
caggtcaacttttcacctgatggacggtttgtcttatcaggagatggtgaaggcagatgc
tggttttgggattggaaatcgtgtaaggtcttcagaactctcaagtgtcatgacggggtc
tgtattggtgcagagtggcatcctctggaacaaagtaaagttgctacttgtggttgggat
ggtttgatcaagtactgggactag
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